Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is fxsA [H]
Identifier: 21226208
GI number: 21226208
Start: 133816
End: 134220
Strand: Direct
Name: fxsA [H]
Synonym: MM_0106
Alternate gene names: 21226208
Gene position: 133816-134220 (Clockwise)
Preceding gene: 21226204
Following gene: 21226211
Centisome position: 3.27
GC content: 45.68
Gene sequence:
>405_bases ATGTTTCTCAAACTCTTTTCTCTGTTTCTGATAATTCCCGTTGTGGAGATTTATCTCCTGCTCAAGGTAGGGGAAATAAT CGGAGCTCTCAATACCGTTCTCATTATTTTGATCACCGCAGGCATCGGGGCTTACCTGACAAAAAGCCAGGGTTTCAGGG TGCTCCGTCAGATCCAGGACGCAACCATGCAGGGTTACATGCCTGGAAACGAACTCCTTCATGGACTCTTTGTATTAATC GGGGGCTTTGCCCTTCTGACCCCTGGATTCCTGACAGATACCATAGGGTTTTCCATGCTTATTCCTCAGATCCGGGAGAT CTATGTGAGAATAGCAAAAGGGATCATAAGGAAAAAGATACAGCAGGGCAACTTCCAGATGAGGATGTATACTGATTTCA GATGA
Upstream 100 bases:
>100_bases AGTAATCATCACTATAGATTCAATAATTATCGCCACAGATAAACAGTAACCATAACCACAGATAACAGTAATAATTTAAA TATCCCTGAAATTGATCATC
Downstream 100 bases:
>100_bases CCGCATTCAGAAATGACAGTATTTCGGGTATGTAACATACCGGTAATCAGACCATGCGGAGACGTTTCAGGACAGAATCA GGGATCGTCCTATAGTTTCA
Product: FxsA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFLKLFSLFLIIPVVEIYLLLKVGEIIGALNTVLIILITAGIGAYLTKSQGFRVLRQIQDATMQGYMPGNELLHGLFVLI GGFALLTPGFLTDTIGFSMLIPQIREIYVRIAKGIIRKKIQQGNFQMRMYTDFR
Sequences:
>Translated_134_residues MFLKLFSLFLIIPVVEIYLLLKVGEIIGALNTVLIILITAGIGAYLTKSQGFRVLRQIQDATMQGYMPGNELLHGLFVLI GGFALLTPGFLTDTIGFSMLIPQIREIYVRIAKGIIRKKIQQGNFQMRMYTDFR >Mature_134_residues MFLKLFSLFLIIPVVEIYLLLKVGEIIGALNTVLIILITAGIGAYLTKSQGFRVLRQIQDATMQGYMPGNELLHGLFVLI GGFALLTPGFLTDTIGFSMLIPQIREIYVRIAKGIIRKKIQQGNFQMRMYTDFR
Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 15113; Mature: 15113
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKLFSLFLIIPVVEIYLLLKVGEIIGALNTVLIILITAGIGAYLTKSQGFRVLRQIQD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATMQGYMPGNELLHGLFVLIGGFALLTPGFLTDTIGFSMLIPQIREIYVRIAKGIIRKKI HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGNFQMRMYTDFR HCCCCEEEEEECCC >Mature Secondary Structure MFLKLFSLFLIIPVVEIYLLLKVGEIIGALNTVLIILITAGIGAYLTKSQGFRVLRQIQD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATMQGYMPGNELLHGLFVLIGGFALLTPGFLTDTIGFSMLIPQIREIYVRIAKGIIRKKI HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGNFQMRMYTDFR HCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]