Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226200
Identifier: 21226200
GI number: 21226200
Start: 126929
End: 127639
Strand: Direct
Name: 21226200
Synonym: MM_0098
Alternate gene names: NA
Gene position: 126929-127639 (Clockwise)
Preceding gene: 21226198
Following gene: 21226204
Centisome position: 3.1
GC content: 45.01
Gene sequence:
>711_bases ATGAGAATTATGCAAGAGAGTACTGCCTCTTTTCCCGGGTCAGACCCGAAAGAAAAATTGTTGAAGCCTGCCAGAGATAT CCGGAGTATCCTGCGCTGGGGCTATCCTAAATTCGCAACTATCCGTTTTGTAGCTGAGCATTCCAGGCTAAGCGCAGAGG AGCGGCACATTCTCAGCAGAGTAATTGTTTCCCCGGAAAAAGTAGTCTCGAGGATCAGGAAGAAAATAGCCTGTGATAGC ATAAATAACAGAGACCTTCTGCTTGATGGGTACAATGTCCTGCTGAGTGTCGACAGCCTCCTCAAAAACGAACCCATGTG GTTCTGCGACGACGGATATATCAGGGACACACGCTATTATTTCGGCAAAAAAAACCAGGCTGAAGATCTCGAGGAAGCCC TTGACTCAGTCCTTGAATTTTTATCAGAAGCCAGCCTGAAGTCAGTAAGCTTCCTTCTTGATTCACAGATTAGCCGGAGT GGAGAACTTGCAGGTTTCATCCGCCGCAAAATTGAAAATTACGGGATTTTGGGAGACGCATACACATCAAAAACTGCGGA TTTTGACCTGAAAAGAGAAGGAGGAAATTCAGAAAAAAACCTTATCATTGCGACTTCAGATGGAATTATAATCGATTCAG TTCGGCAGGTACTTGATATCCCTGCCTGCCTTATGGAAAAAAAAGGAATTGAGCCTCTACGGCTTTACTGA
Upstream 100 bases:
>100_bases ACAGGCAAATTAACTGTCGGGTAGCAAGATTGCTATTTTTATTTGTGCAAATATGTATATATAACATATCTTCACTCATT TAAAGAACTTCCTTCGTGAA
Downstream 100 bases:
>100_bases ATCCTGGCTTTGCCAGCCTGAGCGGACAGGGATTATTAATTTATTACCAGGCGTCCTGTCTGAAACATTCTGCCTGCCTG TAAATTTTTTCAGCTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MRIMQESTASFPGSDPKEKLLKPARDIRSILRWGYPKFATIRFVAEHSRLSAEERHILSRVIVSPEKVVSRIRKKIACDS INNRDLLLDGYNVLLSVDSLLKNEPMWFCDDGYIRDTRYYFGKKNQAEDLEEALDSVLEFLSEASLKSVSFLLDSQISRS GELAGFIRRKIENYGILGDAYTSKTADFDLKREGGNSEKNLIIATSDGIIIDSVRQVLDIPACLMEKKGIEPLRLY
Sequences:
>Translated_236_residues MRIMQESTASFPGSDPKEKLLKPARDIRSILRWGYPKFATIRFVAEHSRLSAEERHILSRVIVSPEKVVSRIRKKIACDS INNRDLLLDGYNVLLSVDSLLKNEPMWFCDDGYIRDTRYYFGKKNQAEDLEEALDSVLEFLSEASLKSVSFLLDSQISRS GELAGFIRRKIENYGILGDAYTSKTADFDLKREGGNSEKNLIIATSDGIIIDSVRQVLDIPACLMEKKGIEPLRLY >Mature_236_residues MRIMQESTASFPGSDPKEKLLKPARDIRSILRWGYPKFATIRFVAEHSRLSAEERHILSRVIVSPEKVVSRIRKKIACDS INNRDLLLDGYNVLLSVDSLLKNEPMWFCDDGYIRDTRYYFGKKNQAEDLEEALDSVLEFLSEASLKSVSFLLDSQISRS GELAGFIRRKIENYGILGDAYTSKTADFDLKREGGNSEKNLIIATSDGIIIDSVRQVLDIPACLMEKKGIEPLRLY
Specific function: Unknown
COG id: COG2454
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007368 - ProDom: PD019177 [H]
Pfam domain/function: PF04256 DUF434 [H]
EC number: NA
Molecular weight: Translated: 26829; Mature: 26829
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIMQESTASFPGSDPKEKLLKPARDIRSILRWGYPKFATIRFVAEHSRLSAEERHILSR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH VIVSPEKVVSRIRKKIACDSINNRDLLLDGYNVLLSVDSLLKNEPMWFCDDGYIRDTRYY HHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCEEECCCEEECCHHH FGKKNQAEDLEEALDSVLEFLSEASLKSVSFLLDSQISRSGELAGFIRRKIENYGILGDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC YTSKTADFDLKREGGNSEKNLIIATSDGIIIDSVRQVLDIPACLMEKKGIEPLRLY CCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRIMQESTASFPGSDPKEKLLKPARDIRSILRWGYPKFATIRFVAEHSRLSAEERHILSR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH VIVSPEKVVSRIRKKIACDSINNRDLLLDGYNVLLSVDSLLKNEPMWFCDDGYIRDTRYY HHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCEEECCCEEECCHHH FGKKNQAEDLEEALDSVLEFLSEASLKSVSFLLDSQISRSGELAGFIRRKIENYGILGDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC YTSKTADFDLKREGGNSEKNLIIATSDGIIIDSVRQVLDIPACLMEKKGIEPLRLY CCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]