Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226177
Identifier: 21226177
GI number: 21226177
Start: 101277
End: 101648
Strand: Direct
Name: 21226177
Synonym: MM_0075
Alternate gene names: NA
Gene position: 101277-101648 (Clockwise)
Preceding gene: 21226173
Following gene: 21226178
Centisome position: 2.47
GC content: 42.74
Gene sequence:
>372_bases GTGTTTTTTGTTGCGGGTTGTGTTGAGAATGAGGGTTCGGATGAACCCGAACCTTCTATACCTTTAGAGGGAGTGGATAA AGGGGGAGCTGTAGGAGCCGAGGAAACTTCCAGTGGAGCAAAATCTGATATAGCTAACGTAGAGATAAGGAACTATACAT ATATACCCCAGAATATTACTGTAAAAATTGGGCAGACTGTAATGTGGACTAATAACGATACTGTCCTTCATGACGTGGTG GGTTCAGGTATTGAATCAGATTACCTTCAGAAAGGAGAGAAATTTATCTATACTTTTGAAGAGGAAGGAACTTACCCGTA TATCTGTTCAGTACACCCCTGGATGGAAGGGGAAGTAACTGTAGGGGCCTGA
Upstream 100 bases:
>100_bases AATAAAGGGCCAAAATGGAATACAGGCATAAAGGCTGTGAGGTTAAGAGGAGAAAAATAGTATGAGAAAGGAAATATTAA TTTTTTTAATAATTCTTGGT
Downstream 100 bases:
>100_bases ATACGAAGAGTTCCTTATATGAATCAGTGAAATAAAAAATCGATAAGGAAAATGACAGCATTAATCCACATTCTGATCTT TTATAACTTGACAGAACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Blue Copper Domain Protein; Plastocyanin-Like Protein; Blue Copper Protein; Amicyanin; Protease Inhibitor Kazal-Type
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MFFVAGCVENEGSDEPEPSIPLEGVDKGGAVGAEETSSGAKSDIANVEIRNYTYIPQNITVKIGQTVMWTNNDTVLHDVV GSGIESDYLQKGEKFIYTFEEEGTYPYICSVHPWMEGEVTVGA
Sequences:
>Translated_123_residues MFFVAGCVENEGSDEPEPSIPLEGVDKGGAVGAEETSSGAKSDIANVEIRNYTYIPQNITVKIGQTVMWTNNDTVLHDVV GSGIESDYLQKGEKFIYTFEEEGTYPYICSVHPWMEGEVTVGA >Mature_123_residues MFFVAGCVENEGSDEPEPSIPLEGVDKGGAVGAEETSSGAKSDIANVEIRNYTYIPQNITVKIGQTVMWTNNDTVLHDVV GSGIESDYLQKGEKFIYTFEEEGTYPYICSVHPWMEGEVTVGA
Specific function: Unknown
COG id: COG3794
COG function: function code C; Plastocyanin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13387; Mature: 13387
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFVAGCVENEGSDEPEPSIPLEGVDKGGAVGAEETSSGAKSDIANVEIRNYTYIPQNIT CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEE VKIGQTVMWTNNDTVLHDVVGSGIESDYLQKGEKFIYTFEEEGTYPYICSVHPWMEGEVT EEECCEEEEECCCEEEEHHHCCCCCCHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCEE VGA ECC >Mature Secondary Structure MFFVAGCVENEGSDEPEPSIPLEGVDKGGAVGAEETSSGAKSDIANVEIRNYTYIPQNIT CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEE VKIGQTVMWTNNDTVLHDVVGSGIESDYLQKGEKFIYTFEEEGTYPYICSVHPWMEGEVT EEECCEEEEECCCEEEEHHHCCCCCCHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCEE VGA ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA