The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226173

Identifier: 21226173

GI number: 21226173

Start: 95590

End: 96258

Strand: Direct

Name: 21226173

Synonym: MM_0071

Alternate gene names: NA

Gene position: 95590-96258 (Clockwise)

Preceding gene: 21226172

Following gene: 21226177

Centisome position: 2.33

GC content: 44.54

Gene sequence:

>669_bases
ATGGCTGCTGAAGAAAAAGTCGACTCCTCTCCGGAAAAAGCCAGCTGTACGGATATATGCGTTGAAAGTGTGTACCCTGA
TGTAACCGGACTGAAAATCTATGGGCACGGAAAACCTGTCCGACTTTTTGTCGCAGGGCTTCACGGAGACGAATGGAAAG
ACACAACAGAAATCCTTCTGGAAATAAAGCCACCTGAAAAAGGGACTCTTGCATTGATCCCTCTCGTAAAAAGAGGAAAA
TATATCTCAACTCTTGACCCGGATTACTATCCCGGAATGGGAAAAGGCATACTTGAAGCCGTTGAATCCCTGAAACCTCA
AATCTATATTGAACTTCACTCCTATTCCGGAGAGAATTTTGAGAAACTCTCAGGAAGGGACAGGATGGATAGAATCGGAG
TTCCTGCTTACAGCGTACTGAAAGAAGGAGTTCTGCTGGGTTCGGTTTCTCCCTGGATCCGGAAGAAGTATTTCCCAAAA
GAAGCTCTTTGCCTCTCTTTTGAGATTCAGAAAGAGAATTTCAGGTCAGGGGAGTTTGTAGCCGGTATTCTTGAGGTTCT
TAAAGAGGCAGAATCAAGGGAAGGGTTCATCGAATACCTGAAAAAGGAATTTCCTGAGCAGGCAAAGAAAGCTATCGAAG
ATTACCGCCAATTTTACGGGGAAATCTGA

Upstream 100 bases:

>100_bases
CTCAGCTCGGAAAAACAGGAAATTTATGTGGTTGCAAAAAGACCTTTCCTCGAAGGAAAAGAGTCAACTGAAGAAAACGA
ATAAAAAGGAATTAAAACGG

Downstream 100 bases:

>100_bases
AAATTTGCCGGAATGAGAATTTACAGAAATGAGAATTTATCTGGAAGTAATATAAGAGAGTTAAATCATTTCTGAGAAGG
AACTCCCGAAGAAAAAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAAEEKVDSSPEKASCTDICVESVYPDVTGLKIYGHGKPVRLFVAGLHGDEWKDTTEILLEIKPPEKGTLALIPLVKRGK
YISTLDPDYYPGMGKGILEAVESLKPQIYIELHSYSGENFEKLSGRDRMDRIGVPAYSVLKEGVLLGSVSPWIRKKYFPK
EALCLSFEIQKENFRSGEFVAGILEVLKEAESREGFIEYLKKEFPEQAKKAIEDYRQFYGEI

Sequences:

>Translated_222_residues
MAAEEKVDSSPEKASCTDICVESVYPDVTGLKIYGHGKPVRLFVAGLHGDEWKDTTEILLEIKPPEKGTLALIPLVKRGK
YISTLDPDYYPGMGKGILEAVESLKPQIYIELHSYSGENFEKLSGRDRMDRIGVPAYSVLKEGVLLGSVSPWIRKKYFPK
EALCLSFEIQKENFRSGEFVAGILEVLKEAESREGFIEYLKKEFPEQAKKAIEDYRQFYGEI
>Mature_221_residues
AAEEKVDSSPEKASCTDICVESVYPDVTGLKIYGHGKPVRLFVAGLHGDEWKDTTEILLEIKPPEKGTLALIPLVKRGKY
ISTLDPDYYPGMGKGILEAVESLKPQIYIELHSYSGENFEKLSGRDRMDRIGVPAYSVLKEGVLLGSVSPWIRKKYFPKE
ALCLSFEIQKENFRSGEFVAGILEVLKEAESREGFIEYLKKEFPEQAKKAIEDYRQFYGEI

Specific function: Unknown

COG id: COG4073

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019218
- InterPro:   IPR012026 [H]

Pfam domain/function: PF09892 DUF2119 [H]

EC number: NA

Molecular weight: Translated: 25078; Mature: 24947

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEEKVDSSPEKASCTDICVESVYPDVTGLKIYGHGKPVRLFVAGLHGDEWKDTTEILL
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCCCCCHHHEEE
EIKPPEKGTLALIPLVKRGKYISTLDPDYYPGMGKGILEAVESLKPQIYIELHSYSGENF
EECCCCCCCEEEEEHHHCCCEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCH
EKLSGRDRMDRIGVPAYSVLKEGVLLGSVSPWIRKKYFPKEALCLSFEIQKENFRSGEFV
HHHCCCCHHHHCCCCHHHHHHCCHHCCCCCHHHHHHCCCCHHEEEEEEEECCCCCCHHHH
AGILEVLKEAESREGFIEYLKKEFPEQAKKAIEDYRQFYGEI
HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAEEKVDSSPEKASCTDICVESVYPDVTGLKIYGHGKPVRLFVAGLHGDEWKDTTEILL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCCCCCHHHEEE
EIKPPEKGTLALIPLVKRGKYISTLDPDYYPGMGKGILEAVESLKPQIYIELHSYSGENF
EECCCCCCCEEEEEHHHCCCEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCH
EKLSGRDRMDRIGVPAYSVLKEGVLLGSVSPWIRKKYFPKEALCLSFEIQKENFRSGEFV
HHHCCCCHHHHCCCCHHHHHHCCHHCCCCCHHHHHHCCCCHHEEEEEEEECCCCCCHHHH
AGILEVLKEAESREGFIEYLKKEFPEQAKKAIEDYRQFYGEI
HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]