Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is fwdB [H]
Identifier: 21226161
GI number: 21226161
Start: 78236
End: 79480
Strand: Direct
Name: fwdB [H]
Synonym: MM_0059
Alternate gene names: 21226161
Gene position: 78236-79480 (Clockwise)
Preceding gene: 21226160
Following gene: 21226162
Centisome position: 1.91
GC content: 46.02
Gene sequence:
>1245_bases ATGGAGAAAAACTATTACGTATGCACAGGCTGCGGGATGCTCTGCGATGACATAGAAGTAGATGTTGAAAATAATAAAAT AAATAAAGTCTATACTGCCTGCAGGATAGGGGTAGCCCACATGAAAGACGGGAAGGAAAGTGCCGCTTTCCTGGTAGACA ATAAACCCGTAGACGAAACAACTGCTATCAGCGAGGCTGCAACTATCCTGAAGAATGCAAAAAACCCTCTTATTTTCGGG CTTGGGACTTCCAGCAACGAAGCCCAGAAACTTGCGATCGAGCTTGCAAAAAAAACCAGTGCAACTCTGGATGATGCTTC TTCATTTAGCCTTGGTGAAGTAATTGAAGCTCTCCTTAACAACAAAACCAAGGTCTGCACTCTTGATGATGTAAGGAACA AAGCCGATGTTTCTATTTTCTGGGGAACAGACCCTTCGGACTCTCACCCGCGTCAACTTTCTAAATACGCCTATTTCCCC AGGGGGACTGAAAAGCAGAGAGGCTGGGAAGAAGAGAGGACTGCAATTTGCATAGATGTCCGGAAGTCACATACTGCAAA GATCTGTGGGAATTATTTCTTCCAGATCCCTCCTGGAGGAGATGCCGAGTTTATTGACGCCCTTATTGCAGCGCTTGCCG GAAAGCTCCCAAAAACCTCTTACAACTTCCCCCCCAAGAGAATCCTTGAGCTGGCAAATATCCTCAAAGGAGCAAAATTC GGCGTAGTTTTCGCAGGGCGTGGTCTTGTTTATTCTCTGGATAACCTCGAACCTCTTATCCGGCTCATGAACGCCCTGAA CGAAAAAGCAAACTTCCATCTCGTACCCATGATAAGACAGTACAATACACGGGGCTTTAATGAAAACCTCTTTAAGGAAA CCGGGTACGTGAACAGTGTAAAATTTGAAGACGGGACTGTGAAACACGGGCCGGAATATTCTGTCGTTGAATCTCTTAAA GAAAAAACAGTTGATGCCGCACTTATCATTGGTTCGGACCCGTTCTCAATCCTTCCCAGGTCTATTGCAAAGAACCTGCT TGAAGTCCCCGTGATCGTGCTCGACCCCTGTGAAACCCTCACATCCAGAAATGCAAAAGTTTACATCAGCACTGCAATCG ATGGAGTAGAGTCAGGAGGAAGTGCAATACGTATGGACGGGGTGAAGGTTGACTTTAAGCCTGCCGTTGAGACAAAACGC CCTTCGGATGAAACAGTTCTCAAAAAGATAATGGAGGCTCTCTGA
Upstream 100 bases:
>100_bases CCTGGGGGAGTGCCGCAGATTCGGGAAGAACAAGATCCTCTGTAATGGCTGTATAGTGACCTGCCCTGTAGAGGCAATCG AGTTTGTGTGAGGCGAGAGG
Downstream 100 bases:
>100_bases TGGATTTCGGATCTTTTCTTAAAGCCCCTGAAATAAAGGTAAAGATTGTAACCTACAGGGATATCTTTCAGGACAAAGCC ATGATTGAAAACCGGTTCGG
Product: tungsten formylmethanofuran dehydrogenase subunit B
Products: NA
Alternate protein names: Tungsten-containing formylmethanofuran dehydrogenase II subunit B [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MEKNYYVCTGCGMLCDDIEVDVENNKINKVYTACRIGVAHMKDGKESAAFLVDNKPVDETTAISEAATILKNAKNPLIFG LGTSSNEAQKLAIELAKKTSATLDDASSFSLGEVIEALLNNKTKVCTLDDVRNKADVSIFWGTDPSDSHPRQLSKYAYFP RGTEKQRGWEEERTAICIDVRKSHTAKICGNYFFQIPPGGDAEFIDALIAALAGKLPKTSYNFPPKRILELANILKGAKF GVVFAGRGLVYSLDNLEPLIRLMNALNEKANFHLVPMIRQYNTRGFNENLFKETGYVNSVKFEDGTVKHGPEYSVVESLK EKTVDAALIIGSDPFSILPRSIAKNLLEVPVIVLDPCETLTSRNAKVYISTAIDGVESGGSAIRMDGVKVDFKPAVETKR PSDETVLKKIMEAL
Sequences:
>Translated_414_residues MEKNYYVCTGCGMLCDDIEVDVENNKINKVYTACRIGVAHMKDGKESAAFLVDNKPVDETTAISEAATILKNAKNPLIFG LGTSSNEAQKLAIELAKKTSATLDDASSFSLGEVIEALLNNKTKVCTLDDVRNKADVSIFWGTDPSDSHPRQLSKYAYFP RGTEKQRGWEEERTAICIDVRKSHTAKICGNYFFQIPPGGDAEFIDALIAALAGKLPKTSYNFPPKRILELANILKGAKF GVVFAGRGLVYSLDNLEPLIRLMNALNEKANFHLVPMIRQYNTRGFNENLFKETGYVNSVKFEDGTVKHGPEYSVVESLK EKTVDAALIIGSDPFSILPRSIAKNLLEVPVIVLDPCETLTSRNAKVYISTAIDGVESGGSAIRMDGVKVDFKPAVETKR PSDETVLKKIMEAL >Mature_414_residues MEKNYYVCTGCGMLCDDIEVDVENNKINKVYTACRIGVAHMKDGKESAAFLVDNKPVDETTAISEAATILKNAKNPLIFG LGTSSNEAQKLAIELAKKTSATLDDASSFSLGEVIEALLNNKTKVCTLDDVRNKADVSIFWGTDPSDSHPRQLSKYAYFP RGTEKQRGWEEERTAICIDVRKSHTAKICGNYFFQIPPGGDAEFIDALIAALAGKLPKTSYNFPPKRILELANILKGAKF GVVFAGRGLVYSLDNLEPLIRLMNALNEKANFHLVPMIRQYNTRGFNENLFKETGYVNSVKFEDGTVKHGPEYSVVESLK EKTVDAALIIGSDPFSILPRSIAKNLLEVPVIVLDPCETLTSRNAKVYISTAIDGVESGGSAIRMDGVKVDFKPAVETKR PSDETVLKKIMEAL
Specific function: Catalyzes the reversible oxidation of CO(2) and methanofuran (MFR) to N-formylmethanofuran (CHO-MFR). This enzyme is oxygen-labile [H]
COG id: COG1029
COG function: function code C; Formylmethanofuran dehydrogenase subunit B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fwdB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016457 - InterPro: IPR006656 [H]
Pfam domain/function: PF00384 Molybdopterin [H]
EC number: =1.2.99.5 [H]
Molecular weight: Translated: 45474; Mature: 45474
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNYYVCTGCGMLCDDIEVDVENNKINKVYTACRIGVAHMKDGKESAAFLVDNKPVDET CCCCEEEEECCCCEECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH TAISEAATILKNAKNPLIFGLGTSSNEAQKLAIELAKKTSATLDDASSFSLGEVIEALLN HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC NKTKVCTLDDVRNKADVSIFWGTDPSDSHPRQLSKYAYFPRGTEKQRGWEEERTAICIDV CCCEEEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHCCCCHHCCEEEEEE RKSHTAKICGNYFFQIPPGGDAEFIDALIAALAGKLPKTSYNFPPKRILELANILKGAKF CCCCHHEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCE GVVFAGRGLVYSLDNLEPLIRLMNALNEKANFHLVPMIRQYNTRGFNENLFKETGYVNSV EEEEECCCEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCHHHHHCCCCEEE KFEDGTVKHGPEYSVVESLKEKTVDAALIIGSDPFSILPRSIAKNLLEVPVIVLDPCETL EECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEECCHHHH TSRNAKVYISTAIDGVESGGSAIRMDGVKVDFKPAVETKRPSDETVLKKIMEAL HCCCCEEEEEEEECCCCCCCCEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MEKNYYVCTGCGMLCDDIEVDVENNKINKVYTACRIGVAHMKDGKESAAFLVDNKPVDET CCCCEEEEECCCCEECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH TAISEAATILKNAKNPLIFGLGTSSNEAQKLAIELAKKTSATLDDASSFSLGEVIEALLN HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC NKTKVCTLDDVRNKADVSIFWGTDPSDSHPRQLSKYAYFPRGTEKQRGWEEERTAICIDV CCCEEEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHCCCCHHCCEEEEEE RKSHTAKICGNYFFQIPPGGDAEFIDALIAALAGKLPKTSYNFPPKRILELANILKGAKF CCCCHHEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCE GVVFAGRGLVYSLDNLEPLIRLMNALNEKANFHLVPMIRQYNTRGFNENLFKETGYVNSV EEEEECCCEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCHHHHHCCCCEEE KFEDGTVKHGPEYSVVESLKEKTVDAALIIGSDPFSILPRSIAKNLLEVPVIVLDPCETL EECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEECCHHHH TSRNAKVYISTAIDGVESGGSAIRMDGVKVDFKPAVETKRPSDETVLKKIMEAL HCCCCEEEEEEEECCCCCCCCEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]