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The map label for this gene is RPL8A

Identifier: 20807841

GI number: 20807841

Start: 1377554

End: 1377877

Strand: Reverse

Name: RPL8A

Synonym: TTE1394

Alternate gene names: NA

Gene position: 1377877-1377554 (Counterclockwise)

Preceding gene: 20807842

Following gene: 20807840

Centisome position: 51.23

GC content: 35.49

Gene sequence:

>324_bases
ATGAGGAATGACAGATTTCACTCTATACTCGGTTTGGCAAAAAAGGCGGGTAAATTGGTTTCAGGCAGTTACAGTGTAGA
AAAATATTTAAAAACCAGAAAAGTTTTTTTGGTGGTCATAGCTGAAGATTTTTCTAAAAGAAGTTCAGAAAAATTTATTA
AACTATGTGAGGACAAAAAAGTCCCCTATCTTGTCTATTCGAACAAACAGGATTTAGGTAGAGCGATAGGAAGAGAAATA
GTCGGAATCATAGCTATTACTGATGAAGGATTTATGAAACTACTCAAGGAGGCGGCAAAGGGGGAAAATTATGGAGGTGA
ATAA

Upstream 100 bases:

>100_bases
AACTGCCTTGAAAAGGCTTTTAAGCATAAAAGGCTTGAGAAGGCGCTGGAAGTCCCTATATCACAAGAAATATACGAACA
ATTGAAGAGGGAGATAATGG

Downstream 100 bases:

>100_bases
TATGTCCAAAACAAGGGTATACGAATTAGCAAAAGAACTTAATATTTCCAGCAAAGATCTTCTCTCCAAATTGAGTGATT
TAGACATAAAAGTAAAAAAC

Product: ribosomal protein HS6-type (S12/L30/L7a)

Products: NA

Alternate protein names: Ribosomal Ae Family Protein; Ribosomal -Type; Ribosomal Protein L7ae Family; Ribosomal Ae; 50S Ribosomal AE

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRNDRFHSILGLAKKAGKLVSGSYSVEKYLKTRKVFLVVIAEDFSKRSSEKFIKLCEDKKVPYLVYSNKQDLGRAIGREI
VGIIAITDEGFMKLLKEAAKGENYGGE

Sequences:

>Translated_107_residues
MRNDRFHSILGLAKKAGKLVSGSYSVEKYLKTRKVFLVVIAEDFSKRSSEKFIKLCEDKKVPYLVYSNKQDLGRAIGREI
VGIIAITDEGFMKLLKEAAKGENYGGE
>Mature_107_residues
MRNDRFHSILGLAKKAGKLVSGSYSVEKYLKTRKVFLVVIAEDFSKRSSEKFIKLCEDKKVPYLVYSNKQDLGRAIGREI
VGIIAITDEGFMKLLKEAAKGENYGGE

Specific function: Unknown

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12034; Mature: 12034

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNDRFHSILGLAKKAGKLVSGSYSVEKYLKTRKVFLVVIAEDFSKRSSEKFIKLCEDKK
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEECHHCCCHHHHHHHHHCCCC
VPYLVYSNKQDLGRAIGREIVGIIAITDEGFMKLLKEAAKGENYGGE
CCEEEECCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRNDRFHSILGLAKKAGKLVSGSYSVEKYLKTRKVFLVVIAEDFSKRSSEKFIKLCEDKK
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEECHHCCCHHHHHHHHHCCCC
VPYLVYSNKQDLGRAIGREIVGIIAITDEGFMKLLKEAAKGENYGGE
CCEEEECCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA