Click here to switch to the map view.

The map label for this gene is 20806988

Identifier: 20806988

GI number: 20806988

Start: 494137

End: 495591

Strand: Direct

Name: 20806988

Synonym: TTE0483

Alternate gene names: NA

Gene position: 494137-495591 (Clockwise)

Preceding gene: 20806987

Following gene: 20806990

Centisome position: 18.37

GC content: 39.45

Gene sequence:

>1455_bases
GTGAAAAAATTTTCTTTAGCTGTTTTTGTTTTGCTTGCTGTCATTCTGATGGGAGGGTGTATGGGGAATTTAAACGCAAA
AGATGATAATCCTCCCATAAATCCCAAGCCTTTAGCTCAGGAGGTTTTAGAAAATCAGACAAAAGAAGTTTCGCTTTACT
TTTTAAATGACAAATCAAACAGCCTTACGATGGAAAAAAGATTCATACCAAAAGATGCGGATGTGCTCAAACAGGTTGTG
CTGGAACTCATAAAAGGACCCAATGAAGAGTATTCAAGACCTATATTTCCAGCAGGTACCAGGCTTTTGTCAATTGATAT
GCAGGAGGGCACAGTTTTTGTCAATTTTTCTAAGGAATTTTTGCAGGAAGGCGATGATGAGAAAATTGATAAATTAAGAG
TGGCAGCTTTGGTCAATGCTCTGACGGATATACTGGGAGTAAACAGTGTGCAGATTTTAGTAGAGGGAAACAAAGTAGAG
CAGGTAGGAAAGTGTAAAATTGGTCTAGAACCATTAAAAAGGATCATGGTGGTAGGAGATGTGTACTACAATCCGGAGAA
AATAAAAAGGTTGCAAGAGAGGGCTGATTTTGGCAAAGAAGCTTGGAGATTTGACCCGCTTCAAGTTTTGAGAAAAGAAG
GTGGAATTATAGGGCTTGGAGAGCAGGACGAGATAGCTTTGAAAGAGGAATTTAGCGGAAAAGCTGTAGCAGAAGTTGTA
CACGACGGGAAAGTGTACAAAGTAGAGCTTATACAGCCTTTTGGAAAGGGCAGCAACTATATATGGCTTATACACAAAGT
TACCCCTTTATTTACTCCAATTCCAGATACAGACCCTACAAAGGGCGAGACCTTCATATACGGTAAAGTTAAAGCCATAG
ATTATGAAGCGAGAGTAATCACTATTGAAAGAGAGTATCAGGACGCTCGAGATTTAAAAAACGAAGTGGGACCAGAGATA
AAAGTACTTCCACACGCTATAATCCACTTTTTAGCAAAAGTAAGCTATACCCCTGATTCAGGGGTTAAATATGCGGAGAA
AGATATAAGTTTAAATAGGATTAAAGTGGGGGATGAGCTTGGCATAATACTGACCAAAGACAAAGAAGCCAGGGCGATAA
TAGTTTCTGACCCCAGCTTAATTCCTTATGAACCTAATATAAAGGTATTATCTCCTGCTAGAAATGAAGCGGTGTCAAGT
CCTTTTAAAGTGATAGGAAAGGCGAGGGTTTTTGAAGGCGGAGTCAACATAAGGCTTATTGACAACAGCGGCAATGTATT
GAATGAAACTTTTGTTCAGGCTAGTAATTCTGCCCCATCGTGGGGAGATTTTGAAGCCATAGTTTCCTATAAGCCTTTAA
AAGAGCCTAGAAATGGCCTTCTACAGGTATTTTCTATAAGCCCTCAGGATGGGTCTATCCAGAACCTTGTATCTATTCCT
TTGAGATTAAAATGA

Upstream 100 bases:

>100_bases
TATTAATTTTTCTTAATAATTTCTTTATATTTTTTTAATCATTGGAAAAGAGGAAAATGGTATTATTGAATTAGAAACAA
AAAAGATGAGGTGGGGAAGG

Downstream 100 bases:

>100_bases
TAGGCTTTTTGAATATGAAGCAATCAGTATTCCATTGGCTATTGTTTCTGCAATTTCGTAAATAAATCCGAGCCTTATTG
AATTTAAATCTTTTGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein LpqB GerMN Domain Protein; Spore Germination Protein; Spore Germination Protein-Like

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKKFSLAVFVLLAVILMGGCMGNLNAKDDNPPINPKPLAQEVLENQTKEVSLYFLNDKSNSLTMEKRFIPKDADVLKQVV
LELIKGPNEEYSRPIFPAGTRLLSIDMQEGTVFVNFSKEFLQEGDDEKIDKLRVAALVNALTDILGVNSVQILVEGNKVE
QVGKCKIGLEPLKRIMVVGDVYYNPEKIKRLQERADFGKEAWRFDPLQVLRKEGGIIGLGEQDEIALKEEFSGKAVAEVV
HDGKVYKVELIQPFGKGSNYIWLIHKVTPLFTPIPDTDPTKGETFIYGKVKAIDYEARVITIEREYQDARDLKNEVGPEI
KVLPHAIIHFLAKVSYTPDSGVKYAEKDISLNRIKVGDELGIILTKDKEARAIIVSDPSLIPYEPNIKVLSPARNEAVSS
PFKVIGKARVFEGGVNIRLIDNSGNVLNETFVQASNSAPSWGDFEAIVSYKPLKEPRNGLLQVFSISPQDGSIQNLVSIP
LRLK

Sequences:

>Translated_484_residues
MKKFSLAVFVLLAVILMGGCMGNLNAKDDNPPINPKPLAQEVLENQTKEVSLYFLNDKSNSLTMEKRFIPKDADVLKQVV
LELIKGPNEEYSRPIFPAGTRLLSIDMQEGTVFVNFSKEFLQEGDDEKIDKLRVAALVNALTDILGVNSVQILVEGNKVE
QVGKCKIGLEPLKRIMVVGDVYYNPEKIKRLQERADFGKEAWRFDPLQVLRKEGGIIGLGEQDEIALKEEFSGKAVAEVV
HDGKVYKVELIQPFGKGSNYIWLIHKVTPLFTPIPDTDPTKGETFIYGKVKAIDYEARVITIEREYQDARDLKNEVGPEI
KVLPHAIIHFLAKVSYTPDSGVKYAEKDISLNRIKVGDELGIILTKDKEARAIIVSDPSLIPYEPNIKVLSPARNEAVSS
PFKVIGKARVFEGGVNIRLIDNSGNVLNETFVQASNSAPSWGDFEAIVSYKPLKEPRNGLLQVFSISPQDGSIQNLVSIP
LRLK
>Mature_484_residues
MKKFSLAVFVLLAVILMGGCMGNLNAKDDNPPINPKPLAQEVLENQTKEVSLYFLNDKSNSLTMEKRFIPKDADVLKQVV
LELIKGPNEEYSRPIFPAGTRLLSIDMQEGTVFVNFSKEFLQEGDDEKIDKLRVAALVNALTDILGVNSVQILVEGNKVE
QVGKCKIGLEPLKRIMVVGDVYYNPEKIKRLQERADFGKEAWRFDPLQVLRKEGGIIGLGEQDEIALKEEFSGKAVAEVV
HDGKVYKVELIQPFGKGSNYIWLIHKVTPLFTPIPDTDPTKGETFIYGKVKAIDYEARVITIEREYQDARDLKNEVGPEI
KVLPHAIIHFLAKVSYTPDSGVKYAEKDISLNRIKVGDELGIILTKDKEARAIIVSDPSLIPYEPNIKVLSPARNEAVSS
PFKVIGKARVFEGGVNIRLIDNSGNVLNETFVQASNSAPSWGDFEAIVSYKPLKEPRNGLLQVFSISPQDGSIQNLVSIP
LRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53884; Mature: 53884

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFSLAVFVLLAVILMGGCMGNLNAKDDNPPINPKPLAQEVLENQTKEVSLYFLNDKSN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCC
SLTMEKRFIPKDADVLKQVVLELIKGPNEEYSRPIFPAGTRLLSIDMQEGTVFVNFSKEF
CEEEHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEECCCEEEEEECHHH
LQEGDDEKIDKLRVAALVNALTDILGVNSVQILVEGNKVEQVGKCKIGLEPLKRIMVVGD
HHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCHHHHHHHEEEEC
VYYNPEKIKRLQERADFGKEAWRFDPLQVLRKEGGIIGLGEQDEIALKEEFSGKAVAEVV
EEECHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCEEECCCCCCEEHHHHCCCHHHHHHH
HDGKVYKVELIQPFGKGSNYIWLIHKVTPLFTPIPDTDPTKGETFIYGKVKAIDYEARVI
HCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEE
TIEREYQDARDLKNEVGPEIKVLPHAIIHFLAKVSYTPDSGVKYAEKDISLNRIKVGDEL
EEEHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCEEHHCCCCEEEEEECCCE
GIILTKDKEARAIIVSDPSLIPYEPNIKVLSPARNEAVSSPFKVIGKARVFEGGVNIRLI
EEEEECCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHCCCHHHHCCCEEEECCCEEEEE
DNSGNVLNETFVQASNSAPSWGDFEAIVSYKPLKEPRNGLLQVFSISPQDGSIQNLVSIP
CCCCCCHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCEEEEEEECCCCCCHHHHEECC
LRLK
CCCC
>Mature Secondary Structure
MKKFSLAVFVLLAVILMGGCMGNLNAKDDNPPINPKPLAQEVLENQTKEVSLYFLNDKSN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCC
SLTMEKRFIPKDADVLKQVVLELIKGPNEEYSRPIFPAGTRLLSIDMQEGTVFVNFSKEF
CEEEHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEECCCEEEEEECHHH
LQEGDDEKIDKLRVAALVNALTDILGVNSVQILVEGNKVEQVGKCKIGLEPLKRIMVVGD
HHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCHHHHHHHEEEEC
VYYNPEKIKRLQERADFGKEAWRFDPLQVLRKEGGIIGLGEQDEIALKEEFSGKAVAEVV
EEECHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCEEECCCCCCEEHHHHCCCHHHHHHH
HDGKVYKVELIQPFGKGSNYIWLIHKVTPLFTPIPDTDPTKGETFIYGKVKAIDYEARVI
HCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEE
TIEREYQDARDLKNEVGPEIKVLPHAIIHFLAKVSYTPDSGVKYAEKDISLNRIKVGDEL
EEEHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCEEHHCCCCEEEEEECCCE
GIILTKDKEARAIIVSDPSLIPYEPNIKVLSPARNEAVSSPFKVIGKARVFEGGVNIRLI
EEEEECCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHCCCHHHHCCCEEEECCCEEEEE
DNSGNVLNETFVQASNSAPSWGDFEAIVSYKPLKEPRNGLLQVFSISPQDGSIQNLVSIP
CCCCCCHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCEEEEEEECCCCCCHHHHEECC
LRLK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA