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The map label for this gene is OmpR [H]

Identifier: 20806986

GI number: 20806986

Start: 491950

End: 492627

Strand: Direct

Name: OmpR [H]

Synonym: TTE0481

Alternate gene names: 20806986

Gene position: 491950-492627 (Clockwise)

Preceding gene: 20806985

Following gene: 20806987

Centisome position: 18.29

GC content: 39.09

Gene sequence:

>678_bases
GTGGAGAGATTGCTTATCATAGATGACGAAGAAATGTTTGTTAAGGGATTGAAACTTTCTTTAGAAGAGGAAGGATTTGA
AGTGGATGCGGCTTACGATGGGGAGGAGGGGCTTGAAAAGGTCAGAATAGGAAATTACGACCTGGTTATTCTTGATATAA
TGCTTCCTAAAATGGATGGTTTCTCAGTTTGTAGAGAAATAAGGACTTTTTCAAACATTCCAATAATAATGCTTACTGCA
AGGGGAGACGATGTGGATAGAATTGTCGGGATAGAAATAGGAGCAGATGACTATCTAGCAAAGCCTTTCAATACTCGAGA
GTTGATTGCAAGAATTAGGGCTCTTTTAAGAAGAGCGTCAAATCCCTATGTGAAGAAAAAAGAAGAGATAAGAAGGGGAG
ATTTGTATATTAACATTCCTGAGAGGGCAGTTTACAAAAGAGGTAAAAAGATTGAGCTCACAAATAAGGAGTTTGAAATA
CTAGTGCTTTTAGCTTCTAATCCCGGCAAAGTGTACACAAAGGATAAGCTTTTAGATCTCATATGGGGTGTTGATTTTTA
TGGCGATGCGAACACAGTGACAGTGCATGTGAGGAAGCTCAGGGAAAAATTAGAGGATGACCCTGCTAATCCCCAGTACA
TTTTTACCAAATGGGGAGCGGGATATTACATGAAATAG

Upstream 100 bases:

>100_bases
GATTGTAAGAGAATCTACGGGATTTAAAGAAGGAAGTAGCCGATGAGGCTATTTTTTTTATTCGCCTTTATGATATACTA
GATTTTGGGAGGTGAAATTG

Downstream 100 bases:

>100_bases
GTGATAAAATGAGTTTGCGGTGGAAAATTTTTTATTTGTATTTGACGATAATGATAATATCTTTGGCTGTCACAGGACTT
TATCTTTACAACTACATTGA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MERLLIIDDEEMFVKGLKLSLEEEGFEVDAAYDGEEGLEKVRIGNYDLVILDIMLPKMDGFSVCREIRTFSNIPIIMLTA
RGDDVDRIVGIEIGADDYLAKPFNTRELIARIRALLRRASNPYVKKKEEIRRGDLYINIPERAVYKRGKKIELTNKEFEI
LVLLASNPGKVYTKDKLLDLIWGVDFYGDANTVTVHVRKLREKLEDDPANPQYIFTKWGAGYYMK

Sequences:

>Translated_225_residues
MERLLIIDDEEMFVKGLKLSLEEEGFEVDAAYDGEEGLEKVRIGNYDLVILDIMLPKMDGFSVCREIRTFSNIPIIMLTA
RGDDVDRIVGIEIGADDYLAKPFNTRELIARIRALLRRASNPYVKKKEEIRRGDLYINIPERAVYKRGKKIELTNKEFEI
LVLLASNPGKVYTKDKLLDLIWGVDFYGDANTVTVHVRKLREKLEDDPANPQYIFTKWGAGYYMK
>Mature_225_residues
MERLLIIDDEEMFVKGLKLSLEEEGFEVDAAYDGEEGLEKVRIGNYDLVILDIMLPKMDGFSVCREIRTFSNIPIIMLTA
RGDDVDRIVGIEIGADDYLAKPFNTRELIARIRALLRRASNPYVKKKEEIRRGDLYINIPERAVYKRGKKIELTNKEFEI
LVLLASNPGKVYTKDKLLDLIWGVDFYGDANTVTVHVRKLREKLEDDPANPQYIFTKWGAGYYMK

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH, ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. Binds to the ftsAZ P1 promoter seque

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=42.2222222222222, Blast_Score=186, Evalue=9e-49,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=38.3928571428571, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=36.5638766519824, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=37.2727272727273, Blast_Score=153, Evalue=7e-39,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=40, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=36.5638766519824, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=37.6623376623377, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=34.9775784753363, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=36.5638766519824, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790552, Length=203, Percent_Identity=36.4532019704434, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=36.7713004484305, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=32.7510917030568, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.5315315315315, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=29.3617021276596, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788550, Length=129, Percent_Identity=31.7829457364341, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788191, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788713, Length=101, Percent_Identity=39.6039603960396, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790437, Length=131, Percent_Identity=29.7709923664122, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25971; Mature: 25971

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLLIIDDEEMFVKGLKLSLEEEGFEVDAAYDGEEGLEKVRIGNYDLVILDIMLPKMDG
CCEEEEECCHHHHHHHHEEEECCCCEEEEECCCCHHHHHHEECCCCCEEEEEEEECCCCH
FSVCREIRTFSNIPIIMLTARGDDVDRIVGIEIGADDYLAKPFNTRELIARIRALLRRAS
HHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
NPYVKKKEEIRRGDLYINIPERAVYKRGKKIELTNKEFEILVLLASNPGKVYTKDKLLDL
CCCCCCHHHHCCCCEEEECCHHHHHHCCCEEEEECCCEEEEEEEECCCCCEEEHHHHHHH
IWGVDFYGDANTVTVHVRKLREKLEDDPANPQYIFTKWGAGYYMK
HHCCEEECCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCCEECC
>Mature Secondary Structure
MERLLIIDDEEMFVKGLKLSLEEEGFEVDAAYDGEEGLEKVRIGNYDLVILDIMLPKMDG
CCEEEEECCHHHHHHHHEEEECCCCEEEEECCCCHHHHHHEECCCCCEEEEEEEECCCCH
FSVCREIRTFSNIPIIMLTARGDDVDRIVGIEIGADDYLAKPFNTRELIARIRALLRRAS
HHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
NPYVKKKEEIRRGDLYINIPERAVYKRGKKIELTNKEFEILVLLASNPGKVYTKDKLLDL
CCCCCCHHHHCCCCEEEECCHHHHHHCCCEEEEECCCEEEEEEEECCCCCEEEHHHHHHH
IWGVDFYGDANTVTVHVRKLREKLEDDPANPQYIFTKWGAGYYMK
HHCCEEECCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 9829949; 10878122 [H]