| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is 20806874
Identifier: 20806874
GI number: 20806874
Start: 386107
End: 387249
Strand: Direct
Name: 20806874
Synonym: TTE0359
Alternate gene names: NA
Gene position: 386107-387249 (Clockwise)
Preceding gene: 20806873
Following gene: 20806875
Centisome position: 14.36
GC content: 35.52
Gene sequence:
>1143_bases ATGAATAAATGGTATGCTTTTACTGGTGTGCTTGTGATAATCATTATAATCATGTATTTAATTTTAAAAGATACTTCTTT AACTTTTAGCTGTTATGAGAGAGAAAAATTTCCGCATTTGATGGGGAATGCTTTAGTAAAAAAACCTTCAGTAGCGGGTA GGCTTAAGATTATAGAAAAAGATGGAAGAAAAATATTGGGGGACCAGTATGGCAATCCAATACAGCTAAGAGGAATGAGT ACACACGGATTGCAGTGGTTTTCAGAGATTATTAATCATAATGCTTTTTCTGGATTGTCAAGAGATTGGGAATCAAACGT GATTAGACTTGCTATGTACGTTGGTGAAGGTGGTTATGCTACAAATCCAAGTGTTAAAGATAAGGTTATAGAAGGAATAA ATTTAGCAATTCAAAATGATATGTATGTAATAGTTGACTGGCATGTTTTAAATCCGGGAGACCCTAATGCGGACATATAC AGTGGCGCAAAAGATTTCTTCAAGGAAATAGCTACTAAATATCCAAATGACCTTCATATAATTTATGAATTAGCAAATGA GCCCAATCCAACCCCTCCAGGAGTGACAAATGATGTTGAGGGGTGGAAAAAAGTTAAAAACTATGCTGAACCGATAATTC AAATGCTGAGAGATATGGGGAACCAAAATATAATTATTGTAGGTTCTCCTAACTGGAGTCAACGCCCGGATTTAGCGGCA GAGGAACCAATAAATGATCCCAATGTAATGTATTCTGTACATTTTTATACAGGTACTCATAAAGTAGAAGAACACGGTAA GCCCGGATATGTTTTTGGCAATATGGCTAAAGCATTGGAAAAAGGTGTACCTATTTTTGTAAGTGAATGGGGTACCAGTG AAGCTAGTGGTGATGGAGGTCCATATTTAGATGAAGCAGATAAATGGCTTGAATTTTTAAATGCCAATAATATAAGCTGG ATAAATTGGTCTTTGGCAAATAAGAATGAAGTTTCAGCAGCATTTTTAACATCTACTAATTTAAATCCTGGTGATGGTAA AGCATGGGCTGTAAATCAATTGAGTCTCTCAGGAGAATATGTAAGAGCAAGAATAAAAGGAATTCCCTATAAACCTATTT CTCGTGAGGCAAGAGGAAAGTAA
Upstream 100 bases:
>100_bases AAGGTGTAATCGAATGAATACAGCATCTATGAGGCAGGGTATAAATTGTTCTGCCTCTTTATTTCTAAGCAAATACCCTT AAATGGAGTGAGATGAGACT
Downstream 100 bases:
>100_bases CTTTATCAAAAACTATAAAACTGAAGAGGTGACTAAAATGAGCAAAAATATTCTAGATATGCGGAATACAGTGCAAATAG GTATTGTAGTGAGGGATATT
Product: cellulase
Products: NA
Alternate protein names: Alkaline cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNKWYAFTGVLVIIIIIMYLILKDTSLTFSCYEREKFPHLMGNALVKKPSVAGRLKIIEKDGRKILGDQYGNPIQLRGMS THGLQWFSEIINHNAFSGLSRDWESNVIRLAMYVGEGGYATNPSVKDKVIEGINLAIQNDMYVIVDWHVLNPGDPNADIY SGAKDFFKEIATKYPNDLHIIYELANEPNPTPPGVTNDVEGWKKVKNYAEPIIQMLRDMGNQNIIIVGSPNWSQRPDLAA EEPINDPNVMYSVHFYTGTHKVEEHGKPGYVFGNMAKALEKGVPIFVSEWGTSEASGDGGPYLDEADKWLEFLNANNISW INWSLANKNEVSAAFLTSTNLNPGDGKAWAVNQLSLSGEYVRARIKGIPYKPISREARGK
Sequences:
>Translated_380_residues MNKWYAFTGVLVIIIIIMYLILKDTSLTFSCYEREKFPHLMGNALVKKPSVAGRLKIIEKDGRKILGDQYGNPIQLRGMS THGLQWFSEIINHNAFSGLSRDWESNVIRLAMYVGEGGYATNPSVKDKVIEGINLAIQNDMYVIVDWHVLNPGDPNADIY SGAKDFFKEIATKYPNDLHIIYELANEPNPTPPGVTNDVEGWKKVKNYAEPIIQMLRDMGNQNIIIVGSPNWSQRPDLAA EEPINDPNVMYSVHFYTGTHKVEEHGKPGYVFGNMAKALEKGVPIFVSEWGTSEASGDGGPYLDEADKWLEFLNANNISW INWSLANKNEVSAAFLTSTNLNPGDGKAWAVNQLSLSGEYVRARIKGIPYKPISREARGK >Mature_380_residues MNKWYAFTGVLVIIIIIMYLILKDTSLTFSCYEREKFPHLMGNALVKKPSVAGRLKIIEKDGRKILGDQYGNPIQLRGMS THGLQWFSEIINHNAFSGLSRDWESNVIRLAMYVGEGGYATNPSVKDKVIEGINLAIQNDMYVIVDWHVLNPGDPNADIY SGAKDFFKEIATKYPNDLHIIYELANEPNPTPPGVTNDVEGWKKVKNYAEPIIQMLRDMGNQNIIIVGSPNWSQRPDLAA EEPINDPNVMYSVHFYTGTHKVEEHGKPGYVFGNMAKALEKGVPIFVSEWGTSEASGDGGPYLDEADKWLEFLNANNISW INWSLANKNEVSAAFLTSTNLNPGDGKAWAVNQLSLSGEYVRARIKGIPYKPISREARGK
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005086 - InterPro: IPR008979 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF03424 CBM_17_28; PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 42527; Mature: 42527
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKWYAFTGVLVIIIIIMYLILKDTSLTFSCYEREKFPHLMGNALVKKPSVAGRLKIIEK CCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCEEEEEEC DGRKILGDQYGNPIQLRGMSTHGLQWFSEIINHNAFSGLSRDWESNVIRLAMYVGEGGYA CCCCHHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHCCCCCCHHCCEEEEEEEECCCCCC TNPSVKDKVIEGINLAIQNDMYVIVDWHVLNPGDPNADIYSGAKDFFKEIATKYPNDLHI CCCCHHHHHHHCCEEEEECCEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCEEE IYELANEPNPTPPGVTNDVEGWKKVKNYAEPIIQMLRDMGNQNIIIVGSPNWSQRPDLAA EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC EEPINDPNVMYSVHFYTGTHKVEEHGKPGYVFGNMAKALEKGVPIFVSEWGTSEASGDGG CCCCCCCCEEEEEEEEECCEEHHHCCCCCEEEHHHHHHHHCCCCEEEECCCCCCCCCCCC PYLDEADKWLEFLNANNISWINWSLANKNEVSAAFLTSTNLNPGDGKAWAVNQLSLSGEY CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCHH VRARIKGIPYKPISREARGK HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNKWYAFTGVLVIIIIIMYLILKDTSLTFSCYEREKFPHLMGNALVKKPSVAGRLKIIEK CCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCEEEEEEC DGRKILGDQYGNPIQLRGMSTHGLQWFSEIINHNAFSGLSRDWESNVIRLAMYVGEGGYA CCCCHHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHCCCCCCHHCCEEEEEEEECCCCCC TNPSVKDKVIEGINLAIQNDMYVIVDWHVLNPGDPNADIYSGAKDFFKEIATKYPNDLHI CCCCHHHHHHHCCEEEEECCEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCEEE IYELANEPNPTPPGVTNDVEGWKKVKNYAEPIIQMLRDMGNQNIIIVGSPNWSQRPDLAA EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC EEPINDPNVMYSVHFYTGTHKVEEHGKPGYVFGNMAKALEKGVPIFVSEWGTSEASGDGG CCCCCCCCEEEEEEEEECCEEHHHCCCCCEEEHHHHHHHHCCCCEEEECCCCCCCCCCCC PYLDEADKWLEFLNANNISWINWSLANKNEVSAAFLTSTNLNPGDGKAWAVNQLSLSGEY CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCHH VRARIKGIPYKPISREARGK HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3098909 [H]