| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is ilvB [H]
Identifier: 20094672
GI number: 20094672
Start: 1221500
End: 1222936
Strand: Reverse
Name: ilvB [H]
Synonym: MK1236
Alternate gene names: 20094672
Gene position: 1222936-1221500 (Counterclockwise)
Preceding gene: 20094673
Following gene: 20094671
Centisome position: 72.15
GC content: 70.77
Gene sequence:
>1437_bases GTGACCTCGTTCAGGTTACGTCCCGTGTTCGGGGTACCCGGGGACGACGTGACCCGACCGTACCTGAGGCTCGCGGAGGA GGACGAGCTAGTCCGGACGACGCGGGAGGACGCGGCCGTGTACGCGGCGATCGGGGCCGCCGAGGTCTCGGGCGAGCCGG CGGCGGCCCTGGCGACCTGCGGGCCCGGGGTGGCGGTCGCGCTGGCGGGGCTGGCGTGCGCGCTGGCCGATCGCGTACCC GTGCTCTGCGCGACCGGCGAGATCACCGAGCGCGGGTTCCAGTCGCTCGTACCCTCGATGGCGTCGGACGGCGTGGAGCT CACGGTGACGGACGACCCGGAGGAAGCCGCACGGACCCTAGCGCGCTCAGAGCCCGTGCTGTACGTCGATCCGGGGTTCG ACCCAGACGGGGTCTCCGCGGAGCTCGAGGGAATCGAGCCCGTCGAGCCGGACCCCGAGGACGTGGAGCGCGTCCGCGGG CTCCTGGAGGGTAAGCGCGTGGCGATCCTGGTGGGACGGGGCTGCTACCGCGCGCGGTGTGGGGAGCTCGTGGAGCGGTT GTGCGAGGTCCTGGAAGCACCGATCGTGGAGACGATGCGCGGCCGGGGCGTGGTGCCCGAGTACCACCCACGTAACGCCG GGGTCGTGGGTCTCAGGGGCTGGGCGAACGACATGGTAGAGGACGCCGACGTCGTGCTCGCCCTAGGGGCCCGGTTGTCG GGACGCACGCGCGCGGACATCGACTGGCCCACCACGGTCGCGGTCGGTTTCGGGGTGGAGGACGCGGACGAGGTCGTGGA GTGCGACGTGCGGGCCTTCGTGGAGGCACTGCTCGAGGACCCTCCGAGGACGGAACCGTGGAACCCGGAGCCGGGCGAGC CGCCGGAGTTCGATCTGGAGCTGTACCGGGTCGTGAAGGCCGCACTGAAGGCCTGGATCGGGCCGGCCACGGTGGACTCG GGTCAGATCACCCCCACCGCGCTGCTGGCCGCCCGGCTGTCGTCCCCGTCCGAGTTGATCCACTCCGGGTCGTTCTGTCC CATGGGGTTCGCGATCCCGGCGGCGCTGGGAGCCTCGGCCCGGGTCCCCGAGATGGCGCTCGCCCTGACCGGGGACGGTG GGTTCATGGTCTCCTGTCAGGAGCTGGAGACGGCGGTCAGGGAGGACCTCCCGATCGCGGTGCTCGTCACCCGTAACGGG GAGTTAGGGTTCACCCGGCAGGTGATGGAAGAGAAGGAGGGCAGGGCCGCCAAGATGGGGCTGGACGCCGACGTTCTGAG TATAGTCGAGTCCCTGGGCGCCGAGGTCGAGGTGATCGAGAAACCGGACCCCGGTGAGGTGAAAAAGGTCCTCAGGGACG TGGAGATGAACGGGGAAACCACCGTCGTGGTCGTCGAGCTCCCGCGCGAGGACGTCCCGATGCCGGGGTCGGGATGA
Upstream 100 bases:
>100_bases TCGAGCGGTGGGCCCGGGAGCTCGGGCTCCGTTTCATGCCCGCGTGCTCCTTCCCCGATATGATCGAGGAGTACTTGAGA ATGTCGAGGGAGGTGGAAGG
Downstream 100 bases:
>100_bases GGAGAACCCCGGTCACCGAGCTGGTGAGGAGGGACAGGCGCCTCGACCGGTCGGAACGACGACGCCCGGATCCGACCCCG GTCCTGACGATGATGAGTAC
Product: acetolactate synthase large subunit-like protein
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MTSFRLRPVFGVPGDDVTRPYLRLAEEDELVRTTREDAAVYAAIGAAEVSGEPAAALATCGPGVAVALAGLACALADRVP VLCATGEITERGFQSLVPSMASDGVELTVTDDPEEAARTLARSEPVLYVDPGFDPDGVSAELEGIEPVEPDPEDVERVRG LLEGKRVAILVGRGCYRARCGELVERLCEVLEAPIVETMRGRGVVPEYHPRNAGVVGLRGWANDMVEDADVVLALGARLS GRTRADIDWPTTVAVGFGVEDADEVVECDVRAFVEALLEDPPRTEPWNPEPGEPPEFDLELYRVVKAALKAWIGPATVDS GQITPTALLAARLSSPSELIHSGSFCPMGFAIPAALGASARVPEMALALTGDGGFMVSCQELETAVREDLPIAVLVTRNG ELGFTRQVMEEKEGRAAKMGLDADVLSIVESLGAEVEVIEKPDPGEVKKVLRDVEMNGETTVVVVELPREDVPMPGSG
Sequences:
>Translated_478_residues MTSFRLRPVFGVPGDDVTRPYLRLAEEDELVRTTREDAAVYAAIGAAEVSGEPAAALATCGPGVAVALAGLACALADRVP VLCATGEITERGFQSLVPSMASDGVELTVTDDPEEAARTLARSEPVLYVDPGFDPDGVSAELEGIEPVEPDPEDVERVRG LLEGKRVAILVGRGCYRARCGELVERLCEVLEAPIVETMRGRGVVPEYHPRNAGVVGLRGWANDMVEDADVVLALGARLS GRTRADIDWPTTVAVGFGVEDADEVVECDVRAFVEALLEDPPRTEPWNPEPGEPPEFDLELYRVVKAALKAWIGPATVDS GQITPTALLAARLSSPSELIHSGSFCPMGFAIPAALGASARVPEMALALTGDGGFMVSCQELETAVREDLPIAVLVTRNG ELGFTRQVMEEKEGRAAKMGLDADVLSIVESLGAEVEVIEKPDPGEVKKVLRDVEMNGETTVVVVELPREDVPMPGSG >Mature_477_residues TSFRLRPVFGVPGDDVTRPYLRLAEEDELVRTTREDAAVYAAIGAAEVSGEPAAALATCGPGVAVALAGLACALADRVPV LCATGEITERGFQSLVPSMASDGVELTVTDDPEEAARTLARSEPVLYVDPGFDPDGVSAELEGIEPVEPDPEDVERVRGL LEGKRVAILVGRGCYRARCGELVERLCEVLEAPIVETMRGRGVVPEYHPRNAGVVGLRGWANDMVEDADVVLALGARLSG RTRADIDWPTTVAVGFGVEDADEVVECDVRAFVEALLEDPPRTEPWNPEPGEPPEFDLELYRVVKAALKAWIGPATVDSG QITPTALLAARLSSPSELIHSGSFCPMGFAIPAALGASARVPEMALALTGDGGFMVSCQELETAVREDLPIAVLVTRNGE LGFTRQVMEEKEGRAAKMGLDADVLSIVESLGAEVEVIEKPDPGEVKKVLRDVEMNGETTVVVVELPREDVPMPGSG
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081685, Length=521, Percent_Identity=26.8714011516315, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI1790104, Length=517, Percent_Identity=24.5647969052224, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1787096, Length=538, Percent_Identity=26.5799256505576, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1786717, Length=511, Percent_Identity=24.0704500978474, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 50756; Mature: 50625
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFRLRPVFGVPGDDVTRPYLRLAEEDELVRTTREDAAVYAAIGAAEVSGEPAAALATC CCCCEECEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHEEEEEECHHHCCCCCCHHHHHC GPGVAVALAGLACALADRVPVLCATGEITERGFQSLVPSMASDGVELTVTDDPEEAARTL CCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH ARSEPVLYVDPGFDPDGVSAELEGIEPVEPDPEDVERVRGLLEGKRVAILVGRGCYRARC HHCCCEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHH GELVERLCEVLEAPIVETMRGRGVVPEYHPRNAGVVGLRGWANDMVEDADVVLALGARLS HHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHEECCCCC GRTRADIDWPTTVAVGFGVEDADEVVECDVRAFVEALLEDPPRTEPWNPEPGEPPEFDLE CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH LYRVVKAALKAWIGPATVDSGQITPTALLAARLSSPSELIHSGSFCPMGFAIPAALGASA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHCCCCC RVPEMALALTGDGGFMVSCQELETAVREDLPIAVLVTRNGELGFTRQVMEEKEGRAAKMG CCCCEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHCC LDADVLSIVESLGAEVEVIEKPDPGEVKKVLRDVEMNGETTVVVVELPREDVPMPGSG CCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TSFRLRPVFGVPGDDVTRPYLRLAEEDELVRTTREDAAVYAAIGAAEVSGEPAAALATC CCCEECEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHEEEEEECHHHCCCCCCHHHHHC GPGVAVALAGLACALADRVPVLCATGEITERGFQSLVPSMASDGVELTVTDDPEEAARTL CCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH ARSEPVLYVDPGFDPDGVSAELEGIEPVEPDPEDVERVRGLLEGKRVAILVGRGCYRARC HHCCCEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHH GELVERLCEVLEAPIVETMRGRGVVPEYHPRNAGVVGLRGWANDMVEDADVVLALGARLS HHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHEECCCCC GRTRADIDWPTTVAVGFGVEDADEVVECDVRAFVEALLEDPPRTEPWNPEPGEPPEFDLE CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH LYRVVKAALKAWIGPATVDSGQITPTALLAARLSSPSELIHSGSFCPMGFAIPAALGASA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHCCCCC RVPEMALALTGDGGFMVSCQELETAVREDLPIAVLVTRNGELGFTRQVMEEKEGRAAKMG CCCCEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHCC LDADVLSIVESLGAEVEVIEKPDPGEVKKVLRDVEMNGETTVVVVELPREDVPMPGSG CCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]