| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094639
Identifier: 20094639
GI number: 20094639
Start: 1195681
End: 1196247
Strand: Reverse
Name: 20094639
Synonym: MK1203
Alternate gene names: NA
Gene position: 1196247-1195681 (Counterclockwise)
Preceding gene: 20094640
Following gene: 20094638
Centisome position: 70.58
GC content: 60.67
Gene sequence:
>567_bases GTGGTCGACAATCTCTACGATCAGTTCGTAAAGTATCACGGCGACGCGCAGGCGTTGGTGGCTGTCTTCACGGGTAAGTC GGTGCATCTCGCCACCGTGTGCGTGGGTGGCTACGCGGGAGACGTAGAGAAGTTGTCGGGCCTCTACTCGACCGTGAGGA CCAGGCCGGAGTCGATGCGGTCCTTCCTCGAGTCGGTGATACCGACCCTCTGGAAGTACTTGAGCATGCACCTACCGGAC GACGTCGGCGATCGTCCCGCTCACATGATCAGCTCGGGTACTCCGTTCTATTCTGGACTAGCCTCAGGCTACGTCCACTC GTACCTGGCGGCGTCCGGAGGCGTACTGATAGCCGACACCAAGGACCCGGGGAGCGTGGAGCGTGCCCGACTGGTGCCGT TCTACCCCGAGAGGGTGGGTAAGATAACGCTGGCTCGGGGATCGAACCTGGACGAGCGGTGCTACTCCTACTCCGAAGTC GGATATTACGAGTGGAACGGTACCAAGTACGCGTGTGAGGCGGGACCGTTGACCAGGTTTAGCGGTAGCTTACAAGGCCG GGGATGA
Upstream 100 bases:
>100_bases GCCTGGAAAATTGGGCAGTTCCTATCAGTATTCAAGCCTCAGTATTCAAGACCACCTACTGTGGTCGTTGCTGATCTCGG GGGACTTCCTACCCGATAGC
Downstream 100 bases:
>100_bases AACCGTCAGGTGGTTCCTGGATTCGTGGAGTGAGAAACTGGACGTAGACGTGTGGGAACTCTTGAAACCGTGTGCCCGTA ACAGGAACATAGCGAGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMRSFLESVIPTLWKYLSMHLPD DVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADTKDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEV GYYEWNGTKYACEAGPLTRFSGSLQGRG
Sequences:
>Translated_188_residues MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMRSFLESVIPTLWKYLSMHLPD DVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADTKDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEV GYYEWNGTKYACEAGPLTRFSGSLQGRG >Mature_188_residues MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMRSFLESVIPTLWKYLSMHLPD DVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADTKDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEV GYYEWNGTKYACEAGPLTRFSGSLQGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20527; Mature: 20527
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMR CCCHHHHHHHHHCCCHHEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHH SFLESVIPTLWKYLSMHLPDDVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADT HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC KDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEVGYYEWNGTKYACEAGPLTRF CCCCCCCCEEECCCCHHHHCEEEEECCCCHHHHHHHHHHCCEEEECCEEEEECCCCCCCC SGSLQGRG CCCCCCCC >Mature Secondary Structure MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMR CCCHHHHHHHHHCCCHHEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHH SFLESVIPTLWKYLSMHLPDDVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADT HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC KDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEVGYYEWNGTKYACEAGPLTRF CCCCCCCCEEECCCCHHHHCEEEEECCCCHHHHHHHHHHCCEEEECCEEEEECCCCCCCC SGSLQGRG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA