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The map label for this gene is 20094441

Identifier: 20094441

GI number: 20094441

Start: 964874

End: 965851

Strand: Direct

Name: 20094441

Synonym: MK1005

Alternate gene names: NA

Gene position: 964874-965851 (Clockwise)

Preceding gene: 20094440

Following gene: 20094442

Centisome position: 56.93

GC content: 64.31

Gene sequence:

>978_bases
GTGCGGGCCGAGCTCTGTGCGGACCTCGAGGAGGCTTTGAGGGCCGGAGGCCACGAAGTCGTCCGCATCGAAAGGGCTTG
CTTCGACATCTTCGTGCGTACCCGCGATGGTCGCGCTTACATAGTAAAAGTGTTGATCAACGCCGACGGGCTGCGCCGGG
AGGTAGCCGAGGAGCTCAGACGCATTTCGCACTTCTTGGAGGCCGTACCGGTGGTCGTGGCGCTTAAACGCCACACCGGC
CCGCTGGAGAAAGGCGTGGTCTACCATCGGTACGAAGTCCCCGTGCTCGACCCGCTGACGTTCGCCCGGCTCGTGGAGGG
GGAGCCGCCGAAGGCCGTGGCGGACCGGGGAGGACAGTACGTCGTGATCCGTGCCGACGAGGTGGATGAACTGGACGTAT
CTAGGGTGCGCCGTCGCCAGCTCCGGCGTGAGGGCGGTAGGATCACACTAGCACGGGCCGAGGAGGCCGACGTCGAGGGG
GTACCGGTGGAGCTCAAGACCCCGGAACACGTGGACACCGGACGCGACCGAATGACGCGGTTCGAGCGCCGTGTAGCGGA
GCTCTTGGAACGGATGGGTGCCGAACGTACGGGGAAGGTTCGCAGGGCCCCCTTCAAGCTCCTGGCTAAGGACGGCGAGA
CCGTGCTGGCACGGGCGGAGGAGGGGGGAGACCGGGAGTCCATAGCTCTCAGGGATGTGGCCAGTGCTACGGGGTCGATG
GGTGTGATCGTGACTCGAGAGCGTTGCAAAGACACGTACGTGCCCACGATCGACATCGGGACCCTCGAGGAGATCAAGGA
CCTCGAGGACCTCAAGGAGTACCTCCAAGAGCGCGATCCGGAGGAGCGTGTGAGACGGCTCGTTGAGGAGGCCGGCATAA
CGTCCCCGAGGGAGATAGCGCAACGCACCGGGATCCGTGAGTCGGTGATACGAGAGTTCCTGCGCAGGATGGGGATCACC
GACGAGAGAAAGGTTTAA

Upstream 100 bases:

>100_bases
AAGGACGACGAGCACTTGCGCAGGTTAGGCTTCTTGATCATAGTGATCGGGGGTCCAACGTCGGTACTAGTGTCCATCGC
GATAGTCGGGGGGTGACGGG

Downstream 100 bases:

>100_bases
ATATAAGTGCTCATCGGTATGCGGATGGACGAAAAGAAGCCGGAAACGGGGGAGTCCGCGTATGGCGATGCTAGCAGGTG
ATGGGAGGCAGGTTCTGATC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRAELCADLEEALRAGGHEVVRIERACFDIFVRTRDGRAYIVKVLINADGLRREVAEELRRISHFLEAVPVVVALKRHTG
PLEKGVVYHRYEVPVLDPLTFARLVEGEPPKAVADRGGQYVVIRADEVDELDVSRVRRRQLRREGGRITLARAEEADVEG
VPVELKTPEHVDTGRDRMTRFERRVAELLERMGAERTGKVRRAPFKLLAKDGETVLARAEEGGDRESIALRDVASATGSM
GVIVTRERCKDTYVPTIDIGTLEEIKDLEDLKEYLQERDPEERVRRLVEEAGITSPREIAQRTGIRESVIREFLRRMGIT
DERKV

Sequences:

>Translated_325_residues
MRAELCADLEEALRAGGHEVVRIERACFDIFVRTRDGRAYIVKVLINADGLRREVAEELRRISHFLEAVPVVVALKRHTG
PLEKGVVYHRYEVPVLDPLTFARLVEGEPPKAVADRGGQYVVIRADEVDELDVSRVRRRQLRREGGRITLARAEEADVEG
VPVELKTPEHVDTGRDRMTRFERRVAELLERMGAERTGKVRRAPFKLLAKDGETVLARAEEGGDRESIALRDVASATGSM
GVIVTRERCKDTYVPTIDIGTLEEIKDLEDLKEYLQERDPEERVRRLVEEAGITSPREIAQRTGIRESVIREFLRRMGIT
DERKV
>Mature_325_residues
MRAELCADLEEALRAGGHEVVRIERACFDIFVRTRDGRAYIVKVLINADGLRREVAEELRRISHFLEAVPVVVALKRHTG
PLEKGVVYHRYEVPVLDPLTFARLVEGEPPKAVADRGGQYVVIRADEVDELDVSRVRRRQLRREGGRITLARAEEADVEG
VPVELKTPEHVDTGRDRMTRFERRVAELLERMGAERTGKVRRAPFKLLAKDGETVLARAEEGGDRESIALRDVASATGSM
GVIVTRERCKDTYVPTIDIGTLEEIKDLEDLKEYLQERDPEERVRRLVEEAGITSPREIAQRTGIRESVIREFLRRMGIT
DERKV

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1005_METKA (Q8TWM7)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614288.1
- GeneID:   1477106
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1005
- NMPDR:   fig|190192.1.peg.1001
- BioCyc:   MKAN190192:MK1005-MONOMER
- HAMAP:   MF_00584
- InterPro:   IPR020886

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36980; Mature: 36980

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAELCADLEEALRAGGHEVVRIERACFDIFVRTRDGRAYIVKVLINADGLRREVAEELR
CCCHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHH
RISHFLEAVPVVVALKRHTGPLEKGVVYHRYEVPVLDPLTFARLVEGEPPKAVADRGGQY
HHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCCHHHHHHHHCCCCCHHHHCCCCCE
VVIRADEVDELDVSRVRRRQLRREGGRITLARAEEADVEGVPVELKTPEHVDTGRDRMTR
EEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHH
FERRVAELLERMGAERTGKVRRAPFKLLAKDGETVLARAEEGGDRESIALRDVASATGSM
HHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCC
GVIVTRERCKDTYVPTIDIGTLEEIKDLEDLKEYLQERDPEERVRRLVEEAGITSPREIA
EEEEEHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
QRTGIRESVIREFLRRMGITDERKV
HHCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRAELCADLEEALRAGGHEVVRIERACFDIFVRTRDGRAYIVKVLINADGLRREVAEELR
CCCHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHH
RISHFLEAVPVVVALKRHTGPLEKGVVYHRYEVPVLDPLTFARLVEGEPPKAVADRGGQY
HHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCCHHHHHHHHCCCCCHHHHCCCCCE
VVIRADEVDELDVSRVRRRQLRREGGRITLARAEEADVEGVPVELKTPEHVDTGRDRMTR
EEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHH
FERRVAELLERMGAERTGKVRRAPFKLLAKDGETVLARAEEGGDRESIALRDVASATGSM
HHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCC
GVIVTRERCKDTYVPTIDIGTLEEIKDLEDLKEYLQERDPEERVRRLVEEAGITSPREIA
EEEEEHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
QRTGIRESVIREFLRRMGITDERKV
HHCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014