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The map label for this gene is 20094439

Identifier: 20094439

GI number: 20094439

Start: 963347

End: 964648

Strand: Reverse

Name: 20094439

Synonym: MK1003

Alternate gene names: NA

Gene position: 964648-963347 (Counterclockwise)

Preceding gene: 20094443

Following gene: 20094435

Centisome position: 56.91

GC content: 61.98

Gene sequence:

>1302_bases
ATGGATTGGGTGGCACTCGATGACACCGACTCACCCGCCGGGGGATGTACCACCCACGCGGCCGTCTTACTCCGTGCGGA
GCTGGCGGAAGCCGGTGCGGAACCCGTCGGTCGCCCGCTGTTAGTTCGATTGAATCCGAACGTGCCGTTCAAGACTAGGG
GTAACGCGGCGGTCGCCCTGCCGGTGGAAGCACCGTGGAGCGTCGACATCGAAGCGGTGGTGCTACGTGCACTTAAGAAG
GTAGTCCGGAAGGGTTACCCGGAGACCCGGCCGGGTCTGGTGGTCTGCGAAGGTGAGCCGCCGAGGGTCTGCGAATCCGT
CTACGAGGAGGCGGTACGGCGCATTTTAAACCCCGGGAGGGTGAAAGAGAGCGTCGACGACGACGTCAACGTGGTCCTAG
AAGGTCGCGGTATCGTCGGTGCCGTTGCGGCCCTGGGCTTCGCCCGCGTCCGGAAGGACCACGAGGTCACGTTCGAGGGG
ATCGCGTACCGTGCCGAGAAGTACTGGGGAACGGAGCGGCGTGTGGAGGAAAGTTCGATCAGAGAGTTCGACCGTAGGAC
GTTCCCCGTAACGTTCGATAATCTGGATAGTAGGGACGGCGACGTGCTCATAACGCCCAACACGCCATGTCCCGTCCTCT
ACGGAGTGAGATCCGTGGAACCGGACGTCCTAGAGGTCGCTCCGGATATGATCAAGACGCGAGAGCCGGTGGTGGAGTAC
GAGATCTTCGAATCGAACCAAGCGACGGATGCGCACCTCGTCCGCGTGGATCGGTTGGCGGACGCCGAGGACTACTCCAA
CCCCGTCCTAGACCTCACGGTCGTTGAAGAGCCTAGGCGAATACCGGGAGGTCACGTCGTGGTGAGGTGTGAGGACGAGG
AGGGCGTCAGGGTAGATATCGCCGCGTTTCGTCCGGCCCGACCGCTCACCGAAGTCGTGGCGGCACTACATCCCGGCGAT
GAAATCCGTGTGGCGGGTGCGCTGAGACCGGAGACTCCGAAACACCCCCGCACGGTGAACGTGGAAAAGCTCCGTGTGCT
GAGACTGGAGCGCGTGGAAGAGGTCCGCAATCCCGTGTGCGGACGGTGTCGGAGGTCGATGAAGTCGGCAGGACGGAAAA
AAGGGTTCAAGTGCAGTTGTGGGGAACGGGCTCCGGAGGACTCGAAGATCGGAGTAGAGGTACCTCGAGAGCTGGTCGAA
GGAGTGACGTACGAGGCACCTCCCGTAGCCCGGAGACACCTATCGAAACCTGAGTATTTAGTGGAGTTAGGACTGCTCGA
GCCTTCACCGCTGAGTCGCTGA

Upstream 100 bases:

>100_bases
ATCCCGACGGCGCCCACCAAGAAAGGCAGGAGGTGGGCGACGGCCGACGCCAATATCTTCTGACCGACGACCACATGATC
ACCCCCGGGTGGAACGTTCG

Downstream 100 bases:

>100_bases
GTCGCGGCTACCGTGAGTACTAAATCCCCAATCCCTTAGCACGTCTCTTGCGCTTCGGTGGTACTATCTCCTTAGGAACT
TCTGCCAGCCAGTGCTTGGA

Product: DNA-binding protein containing a Zn-ribbon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDWVALDDTDSPAGGCTTHAAVLLRAELAEAGAEPVGRPLLVRLNPNVPFKTRGNAAVALPVEAPWSVDIEAVVLRALKK
VVRKGYPETRPGLVVCEGEPPRVCESVYEEAVRRILNPGRVKESVDDDVNVVLEGRGIVGAVAALGFARVRKDHEVTFEG
IAYRAEKYWGTERRVEESSIREFDRRTFPVTFDNLDSRDGDVLITPNTPCPVLYGVRSVEPDVLEVAPDMIKTREPVVEY
EIFESNQATDAHLVRVDRLADAEDYSNPVLDLTVVEEPRRIPGGHVVVRCEDEEGVRVDIAAFRPARPLTEVVAALHPGD
EIRVAGALRPETPKHPRTVNVEKLRVLRLERVEEVRNPVCGRCRRSMKSAGRKKGFKCSCGERAPEDSKIGVEVPRELVE
GVTYEAPPVARRHLSKPEYLVELGLLEPSPLSR

Sequences:

>Translated_433_residues
MDWVALDDTDSPAGGCTTHAAVLLRAELAEAGAEPVGRPLLVRLNPNVPFKTRGNAAVALPVEAPWSVDIEAVVLRALKK
VVRKGYPETRPGLVVCEGEPPRVCESVYEEAVRRILNPGRVKESVDDDVNVVLEGRGIVGAVAALGFARVRKDHEVTFEG
IAYRAEKYWGTERRVEESSIREFDRRTFPVTFDNLDSRDGDVLITPNTPCPVLYGVRSVEPDVLEVAPDMIKTREPVVEY
EIFESNQATDAHLVRVDRLADAEDYSNPVLDLTVVEEPRRIPGGHVVVRCEDEEGVRVDIAAFRPARPLTEVVAALHPGD
EIRVAGALRPETPKHPRTVNVEKLRVLRLERVEEVRNPVCGRCRRSMKSAGRKKGFKCSCGERAPEDSKIGVEVPRELVE
GVTYEAPPVARRHLSKPEYLVELGLLEPSPLSR
>Mature_433_residues
MDWVALDDTDSPAGGCTTHAAVLLRAELAEAGAEPVGRPLLVRLNPNVPFKTRGNAAVALPVEAPWSVDIEAVVLRALKK
VVRKGYPETRPGLVVCEGEPPRVCESVYEEAVRRILNPGRVKESVDDDVNVVLEGRGIVGAVAALGFARVRKDHEVTFEG
IAYRAEKYWGTERRVEESSIREFDRRTFPVTFDNLDSRDGDVLITPNTPCPVLYGVRSVEPDVLEVAPDMIKTREPVVEY
EIFESNQATDAHLVRVDRLADAEDYSNPVLDLTVVEEPRRIPGGHVVVRCEDEEGVRVDIAAFRPARPLTEVVAALHPGD
EIRVAGALRPETPKHPRTVNVEKLRVLRLERVEEVRNPVCGRCRRSMKSAGRKKGFKCSCGERAPEDSKIGVEVPRELVE
GVTYEAPPVARRHLSKPEYLVELGLLEPSPLSR

Specific function: Unknown

COG id: COG1571

COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013696
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF08489 DUF1743; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 47948; Mature: 47948

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWVALDDTDSPAGGCTTHAAVLLRAELAEAGAEPVGRPLLVRLNPNVPFKTRGNAAVAL
CCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCEEEEE
PVEAPWSVDIEAVVLRALKKVVRKGYPETRPGLVVCEGEPPRVCESVYEEAVRRILNPGR
ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCH
VKESVDDDVNVVLEGRGIVGAVAALGFARVRKDHEVTFEGIAYRAEKYWGTERRVEESSI
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHH
REFDRRTFPVTFDNLDSRDGDVLITPNTPCPVLYGVRSVEPDVLEVAPDMIKTREPVVEY
HHHHCCCCCEEECCCCCCCCCEEEECCCCCCCEECCCCCCCHHHHHCHHHHHCCCCCEEE
EIFESNQATDAHLVRVDRLADAEDYSNPVLDLTVVEEPRRIPGGHVVVRCEDEEGVRVDI
EEECCCCCCCHHEEEHHHHCCCHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEE
AAFRPARPLTEVVAALHPGDEIRVAGALRPETPKHPRTVNVEKLRVLRLERVEEVRNPVC
ECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHCHHH
GRCRRSMKSAGRKKGFKCSCGERAPEDSKIGVEVPRELVEGVTYEAPPVARRHLSKPEYL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCE
VELGLLEPSPLSR
EEECCCCCCCCCC
>Mature Secondary Structure
MDWVALDDTDSPAGGCTTHAAVLLRAELAEAGAEPVGRPLLVRLNPNVPFKTRGNAAVAL
CCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCEEEEE
PVEAPWSVDIEAVVLRALKKVVRKGYPETRPGLVVCEGEPPRVCESVYEEAVRRILNPGR
ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCH
VKESVDDDVNVVLEGRGIVGAVAALGFARVRKDHEVTFEGIAYRAEKYWGTERRVEESSI
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHH
REFDRRTFPVTFDNLDSRDGDVLITPNTPCPVLYGVRSVEPDVLEVAPDMIKTREPVVEY
HHHHCCCCCEEECCCCCCCCCEEEECCCCCCCEECCCCCCCHHHHHCHHHHHCCCCCEEE
EIFESNQATDAHLVRVDRLADAEDYSNPVLDLTVVEEPRRIPGGHVVVRCEDEEGVRVDI
EEECCCCCCCHHEEEHHHHCCCHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEE
AAFRPARPLTEVVAALHPGDEIRVAGALRPETPKHPRTVNVEKLRVLRLERVEEVRNPVC
ECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHCHHH
GRCRRSMKSAGRKKGFKCSCGERAPEDSKIGVEVPRELVEGVTYEAPPVARRHLSKPEYL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCE
VELGLLEPSPLSR
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]