| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is yleA [C]
Identifier: 20094428
GI number: 20094428
Start: 951376
End: 952827
Strand: Direct
Name: yleA [C]
Synonym: MK0992
Alternate gene names: 20094428
Gene position: 951376-952827 (Clockwise)
Preceding gene: 20094426
Following gene: 20094430
Centisome position: 56.13
GC content: 58.13
Gene sequence:
>1452_bases ATGATCGATGTCCTCCTGATCAACCCCCCTGATGTCACGACTAAGTACCAGCGATTCTTGGGCATTACAGCGCCTCCGCT TGGACTAGCCTACATCGCCGCGGTGCTCGAGGAGGCGGGATACACGGTTAAAATCCTCGATTGTCCCCCACTGGACATGT CCTTCGAGGACCTGAGACGAGCCGTGCGGAAGCTCCGTCCTAGAATCGTATCCATCATGGCCACGACTCCGATCATTCAC CAAGCCTACCAGGCGGCCAAGGTCGTCAAGGAAGAACTAGAGGACGTCATCGTATGCCTTGGCGGTTATCATCCTACCTT CATGGACGTCGAGTGCCTCAAGGAGTGCCCCTACGTCGACGTCGTGGTACGGCGTGAGGGCGAATTCACGCTCCTGGATC TGGCGAAGGTGTTCATCGACGGCGTAAAGACACTCTCAGAGGTACTGGGGATCACGTACCGGGAGAAGGACGACATCGTC AGAGCCCCTGATCGACCCCTCATTCGCGATCTCGACGCACTACCGTTCCCCGCGCGTCACCTGCTTCCCATGGACAAGTA CACTTTCTTCGGGGCTAAAACCACCGCCACCACGATGGTGTCGAGCAGGGGTTGTCCCGTAGGATGTGACTTCTGCGCTT CTTCAGCGATGCACGGCCACAAACTCCGGATGCACTCGGCCGAGCGTGTGGTTTCCGAGATGGCGCATGTCCACGAGAAC TACGGATCGGACATCATAGCCTTCGTCGATGACACGTTCACGTACGATCGGCGGCGTGTCGAGGAGATCTGTCGGCTCAT CGTGGAAAGCGGTCTAGACGTAACCTGGGGCTGTGCCGCACGCGTCGACACGATCGACAGGGAGTTACTTGAACTCATGC GCGAGGCGGGATGCTCGGTCCTGTTCTTCGGAGTCGAGTCGGGTAGCCAGGAGGTCCTGGACAACGTCGGTAAGGGGTTT ACGGTCGAGCAGACGAAGAAGGCGTTCCAACTCTGCCGCGAGTTCGACATAGTGACCGTGGCTTCGGCTGTGATCGGCTT ACCGGGCGAGACCCACAGGAGTGCCCGGCAGACGATAAAGTTCCTGAAAGAAATCGACCCCGATTACGCCGTGGTGTCCG TCGCGACGCCATATCCCGGCACTAAGTTCTACCAAGAGGCCGTGGAGAAAGGGCTCATCGAGGAAAAGTCGTGGGACAAG TACACCCTCATGGACCCGGTGGTCAGGACGACCGAGCTGTCCCCAGAGGAGGTGAAGAAGTACCAAAAGCGCGCCATGAT CGAGTTCTATCTTCGTCCCCGGTATCTTATCCGACGGCTGAAGGAGGACGGCATCGATGCCGTCCGTGTGACCGGAACGA TGATCGCCGAGGTCGCGTTCAAGAAGATGAAAGCGTTGTTGGCTAAGATCCCGAGTCCTCGGTTTTCACACCGCAAGGGC TCGGACGAGTGA
Upstream 100 bases:
>100_bases TCACGCGTCCACTTTTGAGCTCGGGGGCACACTCCCTGGCTAACTCCATCCCGGTCCTGCGAGGCGAGGTCCGTACCCCC CGGACGGAGGTGATTCCAAC
Downstream 100 bases:
>100_bases CGAACGCCTCGTAACCTAAGGCGCTTAGCGTTTCGACGGCACGTTTCGCATCCTCCTCCCTCTCGAATAACGCGACCGCG CATCCTCCTCCTCCGGCGCC
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRRAVRKLRPRIVSIMATTPIIH QAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVDVVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIV RAPDRPLIRDLDALPFPARHLLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSVLFFGVESGSQEVLDNVGKGF TVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIKFLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDK YTLMDPVVRTTELSPEEVKKYQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG SDE
Sequences:
>Translated_483_residues MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRRAVRKLRPRIVSIMATTPIIH QAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVDVVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIV RAPDRPLIRDLDALPFPARHLLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSVLFFGVESGSQEVLDNVGKGF TVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIKFLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDK YTLMDPVVRTTELSPEEVKKYQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG SDE >Mature_483_residues MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRRAVRKLRPRIVSIMATTPIIH QAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVDVVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIV RAPDRPLIRDLDALPFPARHLLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSVLFFGVESGSQEVLDNVGKGF TVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIKFLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDK YTLMDPVVRTTELSPEEVKKYQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG SDE
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 54452; Mature: 54452
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRR CEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH AVRKLRPRIVSIMATTPIIHQAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE VVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIVRAPDRPLIRDLDALPFPARH EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHH LLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN CCCCCHHEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSV CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCEE LFFGVESGSQEVLDNVGKGFTVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIK EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH FLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDKYTLMDPVVRTTELSPEEVKK HHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCHHHHHH YQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG HHHHHHHHHHHCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SDE CCC >Mature Secondary Structure MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRR CEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH AVRKLRPRIVSIMATTPIIHQAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE VVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIVRAPDRPLIRDLDALPFPARH EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHH LLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN CCCCCHHEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSV CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCEE LFFGVESGSQEVLDNVGKGFTVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIK EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH FLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDKYTLMDPVVRTTELSPEEVKK HHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCHHHHHH YQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG HHHHHHHHHHHCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SDE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]