| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094384
Identifier: 20094384
GI number: 20094384
Start: 908194
End: 910293
Strand: Direct
Name: 20094384
Synonym: MK0948
Alternate gene names: NA
Gene position: 908194-910293 (Clockwise)
Preceding gene: 20094383
Following gene: 20094385
Centisome position: 53.58
GC content: 59.24
Gene sequence:
>2100_bases GTGGGTAACGATATCGTCCCGATCGAGCTCCATACGCGCGCTTTCGACGCGGTTGGAACCCGAATAATCCTGCCCGAGGA TAAGCACGTGACTGCCGTGTACGTCCTCTACGCGGCGACCTGCTGGTGGGACAAGGACGGCAACCCCGTGGACGCCGTTC CCATGACGGTGTGTTACGACGACGGCAGCGCGTACTCGACCTCGGTGGGAATCATCGACTGGTGCGCGACGGATCCCCGC GCGTACGACGACGAGAAGCGCAGGGTCGCCGCCGCCTGTGCCGTCCTACCCCAGCTCGAGGCCCACTGGGTGCGGGGAGA ACCGCTGGTCTACCAAACACCCACCTTGGTCTTCCCCAAGCGCGTGTTCGCGGACGGGCGGGAGGAGCCGAACACGAAGC GTCCGATCCTGTGGCTGCTCAAGCTCGTGTTCCCACCCGATAAACGACCGACCTGGATCGAGTTCGGGTATCACCCGGGT CACCTCTGGGTTCTAGCGATCACCGTGCGCACGACGGACGGGAAGTACTACGCGTTGGACAAGGACGGTCGCAGGGACCT CGGCGAGCCAGAGCAAAAGGTCGTCCTGGAACCTAACGGTGGCGAACTACTTACCGCAGACACCAGCGGTTCGCTCTTTG GGACTTCCGTCAAGGTGACCGCGGAATGGTGCTGGCCGAAGAACGCACAGGTTGAAGCTCTGAATCTCAAGTTCGAGTGG CCTTTGACAACGACCGCCCTAGGCAGTGCCTTGTCGGTGACCGTCCGCGTACCGTCGGGTCATCTACTCCGCGACGCTAT CCCAACTCCCGATGACTGGTACCTTAAATGGCTAAGGGACCAATTGAGGGATGAGATAATCAGATCGGCCGATAACGAGC TCCGCTCGCTGTCCCTTTCTGAGGAGGAAAAGGAGATCGCACGCCGCTGCATCGAGTATAGCGCCAACTTGACCGCCAAC ACGGCCCGGGGTGACGCGTTCGCCGCCCTCACCCTCGTGGCGCTGTACGACCGGCTGGCCTCGCGGATCGCGGAGAAGCT CGGCGTCCACGTTTATCGAGCCGTCCCAGCGTACGTGACCGTCCTGACCGCCTGGCGGGCCGATCTTTGGGCAATCCTCG AACACGTAAACGAGCGGATATCCAAGCACTCGAAAGTGTTAACGTCGTTAGCGCTTCCGAAGGGATACGACACCCTCAGG CACATTGCCTTCACGCAGTTCCTAATCTATCAACCCACCCTGGGTCTGGAAGTGTACGGACCATCCCTCGAGGCCCGAGC CGTCAACGCGGTACTCTCCCTACTACTCCCGGGTCTCGAGCAGACGATCCTCGAGATCGGCAGGGGAGCCTCGGTAGCCG AAGGAGATCGGGTCGATGTCGATTGGCAGGAAGTCCGGGACAAGCTGGGGAACAATCTGAGAGAAATCGGGATCAAGGAT CCCGAAGGTACCGCGCAGGAGATCGTCGAGGCCTTAAAGTACCTGACCGAGTTAGTGAAGTACGAGGACATGGACGAGCG GCTGAAGTCCGCGGGCGTTCAGAGGTACGTCGATCCCTTCCTCGAACGCGTTCCTGTTATCTTCAACCGCACCCCTAGCC TCGAGGCGGCGGTACTATCTTACACGGACGTGGCCACGTGGACGACCACGATCTACACGCTCTTCCCCGTTCCGAGCAAA GGTGCGAGTACTCCCTCCGGTTGCTTCTGCGGTCCAATGACCGATAACCTGAAGAGGTTCTGGAATAGCTTGGCTGACAG CATCTTATACTTCCTAGCTTACCACGCCCTAGGAAACGCCGCTATTTCATTAGCAATTTCGCTTCTCATTGGCGGTGCAA TAGGAGAAATAGCAGCCGGCGTGCTGACGCCTGTCATTGTAGCGGCAATTAAGGCCGGGTACTTTAACGATTGGAGTGAC TGGAACAAGCTAAAAATGTTCGCAAATGAGACTGCGAGCACTGCCCCCGCCTCCTTTACCGCAAAACTGCAGTGGGCCAT CCACTGTTATGGGGGAGGTAGGGCGAAAGCCATAGCGACGACGGTCTCTTTCGCTTTTGCTTACCTATCGAGCGTTTGTA CCGGGGCGAAACTGCCGTAG
Upstream 100 bases:
>100_bases AGAAAGGTACAGAGGACGCCGATCGAGGGCCTAGCGGACGGTAACGCCGAGCGGCCTCTCGAACTCGAGGACCGAGGACG GGAGCGTCATCTACGTACCC
Downstream 100 bases:
>100_bases GGGGCTCTCGGGTGGGTGATCCTTGGGAGGAGTTGGAACGCTTCTCAGACCCGGAATTACTCGAATTCTCCAAGCGCCTC GACGTCGAACTCTCCGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 698
Protein sequence:
>699_residues MGNDIVPIELHTRAFDAVGTRIILPEDKHVTAVYVLYAATCWWDKDGNPVDAVPMTVCYDDGSAYSTSVGIIDWCATDPR AYDDEKRRVAAACAVLPQLEAHWVRGEPLVYQTPTLVFPKRVFADGREEPNTKRPILWLLKLVFPPDKRPTWIEFGYHPG HLWVLAITVRTTDGKYYALDKDGRRDLGEPEQKVVLEPNGGELLTADTSGSLFGTSVKVTAEWCWPKNAQVEALNLKFEW PLTTTALGSALSVTVRVPSGHLLRDAIPTPDDWYLKWLRDQLRDEIIRSADNELRSLSLSEEEKEIARRCIEYSANLTAN TARGDAFAALTLVALYDRLASRIAEKLGVHVYRAVPAYVTVLTAWRADLWAILEHVNERISKHSKVLTSLALPKGYDTLR HIAFTQFLIYQPTLGLEVYGPSLEARAVNAVLSLLLPGLEQTILEIGRGASVAEGDRVDVDWQEVRDKLGNNLREIGIKD PEGTAQEIVEALKYLTELVKYEDMDERLKSAGVQRYVDPFLERVPVIFNRTPSLEAAVLSYTDVATWTTTIYTLFPVPSK GASTPSGCFCGPMTDNLKRFWNSLADSILYFLAYHALGNAAISLAISLLIGGAIGEIAAGVLTPVIVAAIKAGYFNDWSD WNKLKMFANETASTAPASFTAKLQWAIHCYGGGRAKAIATTVSFAFAYLSSVCTGAKLP
Sequences:
>Translated_699_residues MGNDIVPIELHTRAFDAVGTRIILPEDKHVTAVYVLYAATCWWDKDGNPVDAVPMTVCYDDGSAYSTSVGIIDWCATDPR AYDDEKRRVAAACAVLPQLEAHWVRGEPLVYQTPTLVFPKRVFADGREEPNTKRPILWLLKLVFPPDKRPTWIEFGYHPG HLWVLAITVRTTDGKYYALDKDGRRDLGEPEQKVVLEPNGGELLTADTSGSLFGTSVKVTAEWCWPKNAQVEALNLKFEW PLTTTALGSALSVTVRVPSGHLLRDAIPTPDDWYLKWLRDQLRDEIIRSADNELRSLSLSEEEKEIARRCIEYSANLTAN TARGDAFAALTLVALYDRLASRIAEKLGVHVYRAVPAYVTVLTAWRADLWAILEHVNERISKHSKVLTSLALPKGYDTLR HIAFTQFLIYQPTLGLEVYGPSLEARAVNAVLSLLLPGLEQTILEIGRGASVAEGDRVDVDWQEVRDKLGNNLREIGIKD PEGTAQEIVEALKYLTELVKYEDMDERLKSAGVQRYVDPFLERVPVIFNRTPSLEAAVLSYTDVATWTTTIYTLFPVPSK GASTPSGCFCGPMTDNLKRFWNSLADSILYFLAYHALGNAAISLAISLLIGGAIGEIAAGVLTPVIVAAIKAGYFNDWSD WNKLKMFANETASTAPASFTAKLQWAIHCYGGGRAKAIATTVSFAFAYLSSVCTGAKLP >Mature_698_residues GNDIVPIELHTRAFDAVGTRIILPEDKHVTAVYVLYAATCWWDKDGNPVDAVPMTVCYDDGSAYSTSVGIIDWCATDPRA YDDEKRRVAAACAVLPQLEAHWVRGEPLVYQTPTLVFPKRVFADGREEPNTKRPILWLLKLVFPPDKRPTWIEFGYHPGH LWVLAITVRTTDGKYYALDKDGRRDLGEPEQKVVLEPNGGELLTADTSGSLFGTSVKVTAEWCWPKNAQVEALNLKFEWP LTTTALGSALSVTVRVPSGHLLRDAIPTPDDWYLKWLRDQLRDEIIRSADNELRSLSLSEEEKEIARRCIEYSANLTANT ARGDAFAALTLVALYDRLASRIAEKLGVHVYRAVPAYVTVLTAWRADLWAILEHVNERISKHSKVLTSLALPKGYDTLRH IAFTQFLIYQPTLGLEVYGPSLEARAVNAVLSLLLPGLEQTILEIGRGASVAEGDRVDVDWQEVRDKLGNNLREIGIKDP EGTAQEIVEALKYLTELVKYEDMDERLKSAGVQRYVDPFLERVPVIFNRTPSLEAAVLSYTDVATWTTTIYTLFPVPSKG ASTPSGCFCGPMTDNLKRFWNSLADSILYFLAYHALGNAAISLAISLLIGGAIGEIAAGVLTPVIVAAIKAGYFNDWSDW NKLKMFANETASTAPASFTAKLQWAIHCYGGGRAKAIATTVSFAFAYLSSVCTGAKLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77317; Mature: 77186
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNDIVPIELHTRAFDAVGTRIILPEDKHVTAVYVLYAATCWWDKDGNPVDAVPMTVCYD CCCCEEEEEEECHHHHHCCCEEECCCCCCHHEEEEEEHHHEEECCCCCCCCCCEEEEEEC DGSAYSTSVGIIDWCATDPRAYDDEKRRVAAACAVLPQLEAHWVRGEPLVYQTPTLVFPK CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCEECCH RVFADGREEPNTKRPILWLLKLVFPPDKRPTWIEFGYHPGHLWVLAITVRTTDGKYYALD HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCEEEEEC KDGRRDLGEPEQKVVLEPNGGELLTADTSGSLFGTSVKVTAEWCWPKNAQVEALNLKFEW CCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEECEEEEEEEECCCCCCCEEEEEEEEEC PLTTTALGSALSVTVRVPSGHLLRDAIPTPDDWYLKWLRDQLRDEIIRSADNELRSLSLS CCHHHHCCCEEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC EEEKEIARRCIEYSANLTANTARGDAFAALTLVALYDRLASRIAEKLGVHVYRAVPAYVT HHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VLTAWRADLWAILEHVNERISKHSKVLTSLALPKGYDTLRHIAFTQFLIYQPTLGLEVYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEC PSLEARAVNAVLSLLLPGLEQTILEIGRGASVAEGDRVDVDWQEVRDKLGNNLREIGIKD CCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCC PEGTAQEIVEALKYLTELVKYEDMDERLKSAGVQRYVDPFLERVPVIFNRTPSLEAAVLS CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCHHCCCCCCCHHHHEE YTDVATWTTTIYTLFPVPSKGASTPSGCFCGPMTDNLKRFWNSLADSILYFLAYHALGNA HHHHHHHEEEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AISLAISLLIGGAIGEIAAGVLTPVIVAAIKAGYFNDWSDWNKLKMFANETASTAPASFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEE AKLQWAIHCYGGGRAKAIATTVSFAFAYLSSVCTGAKLP EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GNDIVPIELHTRAFDAVGTRIILPEDKHVTAVYVLYAATCWWDKDGNPVDAVPMTVCYD CCCEEEEEEECHHHHHCCCEEECCCCCCHHEEEEEEHHHEEECCCCCCCCCCEEEEEEC DGSAYSTSVGIIDWCATDPRAYDDEKRRVAAACAVLPQLEAHWVRGEPLVYQTPTLVFPK CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCEECCH RVFADGREEPNTKRPILWLLKLVFPPDKRPTWIEFGYHPGHLWVLAITVRTTDGKYYALD HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCEEEEEC KDGRRDLGEPEQKVVLEPNGGELLTADTSGSLFGTSVKVTAEWCWPKNAQVEALNLKFEW CCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEECEEEEEEEECCCCCCCEEEEEEEEEC PLTTTALGSALSVTVRVPSGHLLRDAIPTPDDWYLKWLRDQLRDEIIRSADNELRSLSLS CCHHHHCCCEEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC EEEKEIARRCIEYSANLTANTARGDAFAALTLVALYDRLASRIAEKLGVHVYRAVPAYVT HHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VLTAWRADLWAILEHVNERISKHSKVLTSLALPKGYDTLRHIAFTQFLIYQPTLGLEVYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEC PSLEARAVNAVLSLLLPGLEQTILEIGRGASVAEGDRVDVDWQEVRDKLGNNLREIGIKD CCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCC PEGTAQEIVEALKYLTELVKYEDMDERLKSAGVQRYVDPFLERVPVIFNRTPSLEAAVLS CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCHHCCCCCCCHHHHEE YTDVATWTTTIYTLFPVPSKGASTPSGCFCGPMTDNLKRFWNSLADSILYFLAYHALGNA HHHHHHHEEEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AISLAISLLIGGAIGEIAAGVLTPVIVAAIKAGYFNDWSDWNKLKMFANETASTAPASFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEE AKLQWAIHCYGGGRAKAIATTVSFAFAYLSSVCTGAKLP EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA