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The map label for this gene is ybhR [C]

Identifier: 20094379

GI number: 20094379

Start: 902832

End: 903947

Strand: Reverse

Name: ybhR [C]

Synonym: MK0943

Alternate gene names: 20094379

Gene position: 903947-902832 (Counterclockwise)

Preceding gene: 20094380

Following gene: 20094377

Centisome position: 53.33

GC content: 66.04

Gene sequence:

>1116_bases
TTGTCCTGGCGAGTGATAGCCGTCCGCGATCTGAGGGCCTGGCTCAAGGACCGCAGGAGGCTCGCGCCCACTCTGATCAT
GCCCGTGATCACGATCCTGGTGATGTACGGCGCGTTCCACGACGTCAAGCCCAGGCATGTGACCGTAGCCGTCCTGAGCC
ACAGCTCCGATTTCGACCCCGTCCTCGACGCCCTGAAGTCCGACGACCGGGTGGGCGTCGTCCACGTCCGGAGCGTCGAC
GAGGGTAAGACGATGGTCAAGGAGGGCAGGGCCGTCGTCTTCGTGTACGTTCCGAAGGGGTTCCCGTCGGATAAGGCCAC
CGTGTACTACGACCCCTCGGACCCCATGGGATCGAACTACGTGCGGGGCGTCATCCAGCGCGCCTGGGTCAAGCGCGTCT
CGGAGGAGATGAAGAAGGTCGTGCGCGACCTCCAGGCCGCCTTCCGCTGGATGCCGGCGCCCCAGCCGCCGATCTCGAGA
GTGCCCGGGAACCCGTTCGACTTCGAGGCGCCGGTGAAGGGGCTCAAGTACTTCGACTTCCTGGTGCCGGGACTGGTGGT
GCTGACGGCCACCATGGGGTCGATCTTCGGCATGGGTCGCGTCATGATGGAGGAGATAGAGACCGGCGTCACCTACGCGC
TGTTCGCCGCCCCGATAAGGCCCAGGGACGTCGTGATAGGCAGGTTCCTCAACATGAGCCTCTGGGGGGCCGTCCGCTGC
GGGATCGTGCTGGTGACGGCGCTCGCCCTGGGCGCGAAGGTGCCGCACCCGTTCCTCCTGCTGGGTGTGGGGATCCTGTC
CACCGCCACCATGATCGGGTTCGCCCTGCTGATGGCGTCGCTGGCGGGTCGGTCGGAAGTCGCCGAGATGCTCACCGGGG
CGCTGACGACCCCGATGATGTTCCTGTCGGGGATCTTCATGCCACCCAGCGTCATGCCGGAGTGGGCCTACGAGGTCGCG
CGGGTGAACCCGATGTACTACATGGGGGACGCCGCCAGGAAGGCGGCCCTCCTGGGTTACCTGGACCCCGTCGACATCGC
CGTCCTGGTGGTGTTCGCGACGGTGTTCATCGCGACGGGCGCGATGCTGTACGACAGGATACGGGAGCACCTGTAA

Upstream 100 bases:

>100_bases
TGCTGATCTTCCTCGAAGGTCGCAAGGAGCTCGACGAGCCCTTCGACGAGGTGATGGAGCGTCACGGTTCCGTGCTCGAG
GCTTACGAGGGGGTCGCCTC

Downstream 100 bases:

>100_bases
CGCCGGGTGACGTTCGGATGAGGAAGGCGGCATCGGGGACCGCGGGGATGACCGGAACGGAGCGCGCCGAGCCTCACCCA
CGACGCCTTAAAGCCAACCG

Product: ABC-type multidrug transport system, permease subunit

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC Transporter; ABC Transporter Permease Protein; Multidrug ABC Transporter Permease Component; Abc-2 Type Transporter; ABC-Type Multidrug Transport System Permease Protein; ABC-Type Multidrug Transport System Permease Subunit; Multidrug ABC Transporter Permease; ABC-2 Type Transporter Family; ABC Transporter Multidrug Efflux Pump Permease Subunit; ABC Transporter Permease Component; Daunorubicin Resistance Membrane Protein; ABC Type Transporter Permease Component; ATPase Component ABC-Type Multidrug Transport System

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSWRVIAVRDLRAWLKDRRRLAPTLIMPVITILVMYGAFHDVKPRHVTVAVLSHSSDFDPVLDALKSDDRVGVVHVRSVD
EGKTMVKEGRAVVFVYVPKGFPSDKATVYYDPSDPMGSNYVRGVIQRAWVKRVSEEMKKVVRDLQAAFRWMPAPQPPISR
VPGNPFDFEAPVKGLKYFDFLVPGLVVLTATMGSIFGMGRVMMEEIETGVTYALFAAPIRPRDVVIGRFLNMSLWGAVRC
GIVLVTALALGAKVPHPFLLLGVGILSTATMIGFALLMASLAGRSEVAEMLTGALTTPMMFLSGIFMPPSVMPEWAYEVA
RVNPMYYMGDAARKAALLGYLDPVDIAVLVVFATVFIATGAMLYDRIREHL

Sequences:

>Translated_371_residues
MSWRVIAVRDLRAWLKDRRRLAPTLIMPVITILVMYGAFHDVKPRHVTVAVLSHSSDFDPVLDALKSDDRVGVVHVRSVD
EGKTMVKEGRAVVFVYVPKGFPSDKATVYYDPSDPMGSNYVRGVIQRAWVKRVSEEMKKVVRDLQAAFRWMPAPQPPISR
VPGNPFDFEAPVKGLKYFDFLVPGLVVLTATMGSIFGMGRVMMEEIETGVTYALFAAPIRPRDVVIGRFLNMSLWGAVRC
GIVLVTALALGAKVPHPFLLLGVGILSTATMIGFALLMASLAGRSEVAEMLTGALTTPMMFLSGIFMPPSVMPEWAYEVA
RVNPMYYMGDAARKAALLGYLDPVDIAVLVVFATVFIATGAMLYDRIREHL
>Mature_370_residues
SWRVIAVRDLRAWLKDRRRLAPTLIMPVITILVMYGAFHDVKPRHVTVAVLSHSSDFDPVLDALKSDDRVGVVHVRSVDE
GKTMVKEGRAVVFVYVPKGFPSDKATVYYDPSDPMGSNYVRGVIQRAWVKRVSEEMKKVVRDLQAAFRWMPAPQPPISRV
PGNPFDFEAPVKGLKYFDFLVPGLVVLTATMGSIFGMGRVMMEEIETGVTYALFAAPIRPRDVVIGRFLNMSLWGAVRCG
IVLVTALALGAKVPHPFLLLGVGILSTATMIGFALLMASLAGRSEVAEMLTGALTTPMMFLSGIFMPPSVMPEWAYEVAR
VNPMYYMGDAARKAALLGYLDPVDIAVLVVFATVFIATGAMLYDRIREHL

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40955; Mature: 40824

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRVIAVRDLRAWLKDRRRLAPTLIMPVITILVMYGAFHDVKPRHVTVAVLSHSSDFDP
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHH
VLDALKSDDRVGVVHVRSVDEGKTMVKEGRAVVFVYVPKGFPSDKATVYYDPSDPMGSNY
HHHHHCCCCCEEEEEEECCCCHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCHH
VRGVIQRAWVKRVSEEMKKVVRDLQAAFRWMPAPQPPISRVPGNPFDFEAPVKGLKYFDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LVPGLVVLTATMGSIFGMGRVMMEEIETGVTYALFAAPIRPRDVVIGRFLNMSLWGAVRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHH
GIVLVTALALGAKVPHPFLLLGVGILSTATMIGFALLMASLAGRSEVAEMLTGALTTPMM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLSGIFMPPSVMPEWAYEVARVNPMYYMGDAARKAALLGYLDPVDIAVLVVFATVFIATG
HHHCCCCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLYDRIREHL
HHHHHHHHHCC
>Mature Secondary Structure 
SWRVIAVRDLRAWLKDRRRLAPTLIMPVITILVMYGAFHDVKPRHVTVAVLSHSSDFDP
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHH
VLDALKSDDRVGVVHVRSVDEGKTMVKEGRAVVFVYVPKGFPSDKATVYYDPSDPMGSNY
HHHHHCCCCCEEEEEEECCCCHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCHH
VRGVIQRAWVKRVSEEMKKVVRDLQAAFRWMPAPQPPISRVPGNPFDFEAPVKGLKYFDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LVPGLVVLTATMGSIFGMGRVMMEEIETGVTYALFAAPIRPRDVVIGRFLNMSLWGAVRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHH
GIVLVTALALGAKVPHPFLLLGVGILSTATMIGFALLMASLAGRSEVAEMLTGALTTPMM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLSGIFMPPSVMPEWAYEVARVNPMYYMGDAARKAALLGYLDPVDIAVLVVFATVFIATG
HHHCCCCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLYDRIREHL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA