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The map label for this gene is Sss1

Identifier: 20094258

GI number: 20094258

Start: 782450

End: 782635

Strand: Direct

Name: Sss1

Synonym: MK0822

Alternate gene names: 20094258

Gene position: 782450-782635 (Clockwise)

Preceding gene: 20094257

Following gene: 20094259

Centisome position: 46.16

GC content: 56.45

Gene sequence:

>186_bases
GTGAGTACCTACGAAGAACTGATCTCCCTGTTACGGGACTGTAAGCGCGTCCTTCGAGCCGCCCGGAAGCCTACCTGGGA
CGAGTACATAGAGTCGGCTAAGATCGCCGGACTCGGCATTCTCATCGTGGGCGGAGTAGGGTTCCTGATCAGAGTGATCG
TGCAGTTGATCGAGCTCTACACGTGA

Upstream 100 bases:

>100_bases
AGTCCCCGAGGTGTCGAAAGGAGGTGCGGAATCATCCGAAGATGAGAGACCGTCCTCACTCGAGGATCTGGAGAAGATCC
TCTAAGGGGGCCAAGATTCC

Downstream 100 bases:

>100_bases
GTGGGGTAGGTTGGATTGGCCGAGACCGACTCGACGAAGCTCTACGCCGTCCGCGTGCAGGCGGGTCGAGAGGAGGCCAC
CGCTGACATGCTCGTGATGC

Product: protein translocase subunit Sss1

Products: NA

Alternate protein names: Protein transport protein Sec61 gamma subunit homolog

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MSTYEELISLLRDCKRVLRAARKPTWDEYIESAKIAGLGILIVGGVGFLIRVIVQLIELYT

Sequences:

>Translated_61_residues
MSTYEELISLLRDCKRVLRAARKPTWDEYIESAKIAGLGILIVGGVGFLIRVIVQLIELYT
>Mature_60_residues
STYEELISLLRDCKRVLRAARKPTWDEYIESAKIAGLGILIVGGVGFLIRVIVQLIELYT

Specific function: Involved in protein export

COG id: COG2443

COG function: function code U; Preprotein translocase subunit Sss1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECE_METKA (Q8TX54)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614105.1
- ProteinModelPortal:   Q8TX54
- SMR:   Q8TX54
- GeneID:   1476923
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0822
- NMPDR:   fig|190192.1.peg.818
- HOGENOM:   HBG733395
- OMA:   WDEYIES
- BioCyc:   MKAN190192:MK0822-MONOMER
- HAMAP:   MF_00422
- InterPro:   IPR022943
- InterPro:   IPR008158
- TIGRFAMs:   TIGR00327

Pfam domain/function: SSF103456 SecE_euk_arc

EC number: NA

Molecular weight: Translated: 6895; Mature: 6764

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc4bdae8)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYEELISLLRDCKRVLRAARKPTWDEYIESAKIAGLGILIVGGVGFLIRVIVQLIELY
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T
H
>Mature Secondary Structure 
STYEELISLLRDCKRVLRAARKPTWDEYIESAKIAGLGILIVGGVGFLIRVIVQLIELY
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T
H

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11930014