| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094237
Identifier: 20094237
GI number: 20094237
Start: 762431
End: 762814
Strand: Direct
Name: 20094237
Synonym: MK0800
Alternate gene names: NA
Gene position: 762431-762814 (Clockwise)
Preceding gene: 20094235
Following gene: 20094238
Centisome position: 44.98
GC content: 59.11
Gene sequence:
>384_bases ATGCTCGCAGACGTTCCCTTCGTCACCGTCCGAAGGCTCAACGTTACGGTCCGGGACGTACTTAGATGCGTGCTCGGGCT TCGGGACGTCGAGGTAGACACGTACTTTGCATTGCTCGAGCGCGGTGAAGCCACGGTATACGATCTGGCGGAGGAACTAG ATCGCGACCGTACGACGGTCCAAAAAGCGCTGAAAAGCCTGGTATACGCGGGTTTAGTCACGCGTCGCAAGGAAACCCGG CCGCGCGGTGGGTTCGTGTACGTGTACAAGGCGGTACCCTTTGAGGAGGCGCGGAAAATAGTCCTTAGGGCGCTCGACGA ATGGTACGAGGCAGTAAAGGATGCTTTGGAGCGTGCGGATGTTCCGAGGTCCGGCCCGGAGTGA
Upstream 100 bases:
>100_bases GTAGTGTCCCCCGTGCTCTGATGTGACGATACTCCGCACACATCCACGAGGCTGGATCTATATATACATTCCGATTAGGC TTAGACCGGTGGGGGTGCCG
Downstream 100 bases:
>100_bases TTCAATCCCCTGACGGCACGTACGTGGTGAGGCTGGCACTTCCGCCGGGATTCGTCAAGGCTGAGATACTGAGGACCGTG GCGGAGCTCGCGGAACGGTA
Product: transcription regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLADVPFVTVRRLNVTVRDVLRCVLGLRDVEVDTYFALLERGEATVYDLAEELDRDRTTVQKALKSLVYAGLVTRRKETR PRGGFVYVYKAVPFEEARKIVLRALDEWYEAVKDALERADVPRSGPE
Sequences:
>Translated_127_residues MLADVPFVTVRRLNVTVRDVLRCVLGLRDVEVDTYFALLERGEATVYDLAEELDRDRTTVQKALKSLVYAGLVTRRKETR PRGGFVYVYKAVPFEEARKIVLRALDEWYEAVKDALERADVPRSGPE >Mature_127_residues MLADVPFVTVRRLNVTVRDVLRCVLGLRDVEVDTYFALLERGEATVYDLAEELDRDRTTVQKALKSLVYAGLVTRRKETR PRGGFVYVYKAVPFEEARKIVLRALDEWYEAVKDALERADVPRSGPE
Specific function: Unknown
COG id: COG3355
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1503 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002831 - InterPro: IPR011991 [H]
Pfam domain/function: PF01978 TrmB [H]
EC number: NA
Molecular weight: Translated: 14575; Mature: 14575
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLADVPFVTVRRLNVTVRDVLRCVLGLRDVEVDTYFALLERGEATVYDLAEELDRDRTTV CCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHH QKALKSLVYAGLVTRRKETRPRGGFVYVYKAVPFEEARKIVLRALDEWYEAVKDALERAD HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VPRSGPE CCCCCCC >Mature Secondary Structure MLADVPFVTVRRLNVTVRDVLRCVLGLRDVEVDTYFALLERGEATVYDLAEELDRDRTTV CCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHH QKALKSLVYAGLVTRRKETRPRGGFVYVYKAVPFEEARKIVLRALDEWYEAVKDALERAD HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VPRSGPE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]