| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094223
Identifier: 20094223
GI number: 20094223
Start: 747316
End: 747681
Strand: Direct
Name: 20094223
Synonym: MK0786
Alternate gene names: NA
Gene position: 747316-747681 (Clockwise)
Preceding gene: 20094221
Following gene: 20094224
Centisome position: 44.09
GC content: 56.83
Gene sequence:
>366_bases TTGAAGTATTTCAAGAGGTTGTCCGATCGGGAGCGCGCGATATTCGAGGCTGGAATCACGCTGGGCGCTATATATCATCA GTTCTGCGGCACGCCTGTATCACCCGGCACCGCGGAGGAGGTGGCCAAGTGTATCGAACGTGCTGCCCTACTTCAGCCCT GCGTAATCGATGCTCGGGTGGAGGTGGACGTATCATCCGAGGATACCGACAACTACGGTGGGTACACGGAGGTTTCAGGC CGGAACCTACGAGTTACGATTGTAACTAGGTGCGGGGAGTGGGAGGCCGTAGGGAAGCTCGAGTTCATCGAGGAGCTGAA CTACCCACTTATGTGGGTTGAGGAGATCCGGCGGGTGGAACAGTGA
Upstream 100 bases:
>100_bases AGTCCGCGCGCTCGTAGACGATTTCCGCGAGGAGCTCTCCCTTCTCTCCCGCTCCCTCCTCAAGGTCTTTTATCAGCTCA TCCAAGGGGGAGACCCCGAC
Downstream 100 bases:
>100_bases CCGTTATCGGGATAGCCGCCGACTTCGATCCACCCCACCGGGGACACGCTTACCTATTAGACCGTGCCCGAGACCTCGGT GACGAAGTCGTGGTGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKYFKRLSDRERAIFEAGITLGAIYHQFCGTPVSPGTAEEVAKCIERAALLQPCVIDARVEVDVSSEDTDNYGGYTEVSG RNLRVTIVTRCGEWEAVGKLEFIEELNYPLMWVEEIRRVEQ
Sequences:
>Translated_121_residues MKYFKRLSDRERAIFEAGITLGAIYHQFCGTPVSPGTAEEVAKCIERAALLQPCVIDARVEVDVSSEDTDNYGGYTEVSG RNLRVTIVTRCGEWEAVGKLEFIEELNYPLMWVEEIRRVEQ >Mature_121_residues MKYFKRLSDRERAIFEAGITLGAIYHQFCGTPVSPGTAEEVAKCIERAALLQPCVIDARVEVDVSSEDTDNYGGYTEVSG RNLRVTIVTRCGEWEAVGKLEFIEELNYPLMWVEEIRRVEQ
Specific function: Unknown
COG id: COG2098
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007179 - InterPro: IPR007181 - ProDom: PD027636 [H]
Pfam domain/function: PF04036 DUF372; PF04038 DUF381 [H]
EC number: NA
Molecular weight: Translated: 13735; Mature: 13735
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFKRLSDRERAIFEAGITLGAIYHQFCGTPVSPGTAEEVAKCIERAALLQPCVIDARV CCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCEE EVDVSSEDTDNYGGYTEVSGRNLRVTIVTRCGEWEAVGKLEFIEELNYPLMWVEEIRRVE EEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHC Q C >Mature Secondary Structure MKYFKRLSDRERAIFEAGITLGAIYHQFCGTPVSPGTAEEVAKCIERAALLQPCVIDARV CCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCEE EVDVSSEDTDNYGGYTEVSGRNLRVTIVTRCGEWEAVGKLEFIEELNYPLMWVEEIRRVE EEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]