| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094207
Identifier: 20094207
GI number: 20094207
Start: 730816
End: 731811
Strand: Direct
Name: 20094207
Synonym: MK0770
Alternate gene names: NA
Gene position: 730816-731811 (Clockwise)
Preceding gene: 20094206
Following gene: 20094208
Centisome position: 43.12
GC content: 58.03
Gene sequence:
>996_bases GTGAAACGACGGGCAATACCGGCGATGGCGGCGGGTGTAGCCGTTGTCCTCATCATGATTTGGTCGTTCGATCCTCGTAA GGTCCTCACCGTAATCGCGAGAACGGAGCCGCGGCTGTTCGCGCTCGCCGTCTGTATCCAACTGGTTGACTTACTACTGT GGGCGCTGCGATGGCACCTGGTGTTGGTACGAGGCGGGGTAAAGGCACCGTTCCGCCTGGTCTTCGCGGTCAATAACGTC TCGATGCTCGTGAACAACATCACCCCGAGCGCCAGGAGCGGCGGTGAGCCACTCCGTGTGTACCTACTGGCTCGTATGAC CAGGTACCGGGCGCGTGATATCGCCTCCTCCGTCGTTATCGATAGGGTTCTCGACTACTTTCCCCTGACGTTACTACTAC TGTTGAGCGCCTTCCTGATCGCGGGAAGTGGAGGAAGAGGCGGGATTCTCGTCATCCTACTCGGTGGCGTGTCTTTTCTT ACAGCCGCTTTGATACTGTCGCTTTGGTTCTTAGCGAGTGAGCGATACGTGCACAGGGTCGCTCGAGGGGTTCTCCGGCT CCTGTCCCGTGTATCTCGTCGCGTACGCGCACGCCGCCTGTGGGAGGAGCTTGATGAGTGGGTGGAAAGGTTCGTGAAGC AGCTTCGAGAGCTCCTCCAGGATCGTCTCACGCTGATTCAGGGCACCCTGTTATCGGCTGCAGTGTGGGGGTGCGAGATC CTCAGGACATACGTCGTGTTTTTATCGTTGGGACGCGAGGTGCCCCTACCCGTTATCGTGGTGTCGTTTACGGTCTCGAT GTTCGCGGGTGTTCTCCCGTTACTTCCCGGTGGACTCGGACTGGTGGAGATATCCACTGCATCGGTTTACAGGCTGTGGG GGATCGACCCGGGAACCAGCGCTGCGGTTGCACTATTAGACCGGCTGATCTCGTACTGGATGGTGAACGCGATCGGTGTG ATCAGTCTTTTACGCATCTCACGGCGAGAAAGATAA
Upstream 100 bases:
>100_bases GGCGTTGTCTTCCTCCCCCATCGTGCGGATGTCCCTGGATTCTTCTACGCAGTACTCGTTAAGGAAGGATGAGGGAGTAG ACGTCGTGTCCGACGGCGTC
Downstream 100 bases:
>100_bases GGAGGTGTGATGTCCTTGCCATACGAGCTCGGGAAAGTCGAGACGATTATAAAGCCGGATGACGGTGGGGTGATCTCCGC CGATATAAAAGTGTTGGCTA
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKRRAIPAMAAGVAVVLIMIWSFDPRKVLTVIARTEPRLFALAVCIQLVDLLLWALRWHLVLVRGGVKAPFRLVFAVNNV SMLVNNITPSARSGGEPLRVYLLARMTRYRARDIASSVVIDRVLDYFPLTLLLLLSAFLIAGSGGRGGILVILLGGVSFL TAALILSLWFLASERYVHRVARGVLRLLSRVSRRVRARRLWEELDEWVERFVKQLRELLQDRLTLIQGTLLSAAVWGCEI LRTYVVFLSLGREVPLPVIVVSFTVSMFAGVLPLLPGGLGLVEISTASVYRLWGIDPGTSAAVALLDRLISYWMVNAIGV ISLLRISRRER
Sequences:
>Translated_331_residues MKRRAIPAMAAGVAVVLIMIWSFDPRKVLTVIARTEPRLFALAVCIQLVDLLLWALRWHLVLVRGGVKAPFRLVFAVNNV SMLVNNITPSARSGGEPLRVYLLARMTRYRARDIASSVVIDRVLDYFPLTLLLLLSAFLIAGSGGRGGILVILLGGVSFL TAALILSLWFLASERYVHRVARGVLRLLSRVSRRVRARRLWEELDEWVERFVKQLRELLQDRLTLIQGTLLSAAVWGCEI LRTYVVFLSLGREVPLPVIVVSFTVSMFAGVLPLLPGGLGLVEISTASVYRLWGIDPGTSAAVALLDRLISYWMVNAIGV ISLLRISRRER >Mature_331_residues MKRRAIPAMAAGVAVVLIMIWSFDPRKVLTVIARTEPRLFALAVCIQLVDLLLWALRWHLVLVRGGVKAPFRLVFAVNNV SMLVNNITPSARSGGEPLRVYLLARMTRYRARDIASSVVIDRVLDYFPLTLLLLLSAFLIAGSGGRGGILVILLGGVSFL TAALILSLWFLASERYVHRVARGVLRLLSRVSRRVRARRLWEELDEWVERFVKQLRELLQDRLTLIQGTLLSAAVWGCEI LRTYVVFLSLGREVPLPVIVVSFTVSMFAGVLPLLPGGLGLVEISTASVYRLWGIDPGTSAAVALLDRLISYWMVNAIGV ISLLRISRRER
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0104 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022791 - InterPro: IPR005242 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: NA
Molecular weight: Translated: 36905; Mature: 36905
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRAIPAMAAGVAVVLIMIWSFDPRKVLTVIARTEPRLFALAVCIQLVDLLLWALRWHL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VLVRGGVKAPFRLVFAVNNVSMLVNNITPSARSGGEPLRVYLLARMTRYRARDIASSVVI HHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DRVLDYFPLTLLLLLSAFLIAGSGGRGGILVILLGGVSFLTAALILSLWFLASERYVHRV HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH ARGVLRLLSRVSRRVRARRLWEELDEWVERFVKQLRELLQDRLTLIQGTLLSAAVWGCEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTYVVFLSLGREVPLPVIVVSFTVSMFAGVLPLLPGGLGLVEISTASVYRLWGIDPGTS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHEEEEECCCCCHH AAVALLDRLISYWMVNAIGVISLLRISRRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRRAIPAMAAGVAVVLIMIWSFDPRKVLTVIARTEPRLFALAVCIQLVDLLLWALRWHL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VLVRGGVKAPFRLVFAVNNVSMLVNNITPSARSGGEPLRVYLLARMTRYRARDIASSVVI HHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DRVLDYFPLTLLLLLSAFLIAGSGGRGGILVILLGGVSFLTAALILSLWFLASERYVHRV HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH ARGVLRLLSRVSRRVRARRLWEELDEWVERFVKQLRELLQDRLTLIQGTLLSAAVWGCEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTYVVFLSLGREVPLPVIVVSFTVSMFAGVLPLLPGGLGLVEISTASVYRLWGIDPGTS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHEEEEECCCCCHH AAVALLDRLISYWMVNAIGVISLLRISRRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]