| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094104
Identifier: 20094104
GI number: 20094104
Start: 625919
End: 626347
Strand: Direct
Name: 20094104
Synonym: MK0666
Alternate gene names: NA
Gene position: 625919-626347 (Clockwise)
Preceding gene: 20094103
Following gene: 20094105
Centisome position: 36.93
GC content: 62.94
Gene sequence:
>429_bases TTGCTCCGCAGGGACGCGTGGCGGCAGGCCCGGTTCGTCCACCCCAGGAGCTACCGTGAGAAGATCCTACGTTCCCTGTT CTTCGCACTGACCGCGAGGATCAACCAGATGCGGCGACTGGACCCCGAGGAATACCCGGAGGACCCCATCGAGGGTTACG ATAGGTTCTTGGAGATCGTACGCGAGTACGCCGAGGACCCGGACTACGACTCCCCACTACTCCTCCTGTACGAGTCCCTC TCGGCCGCCTACGCCATCTTCCTACGCGGTGAGCCGGTTCACCCGCCCGGTACGGAGTTCCCCGGAGTAGGGAAGGTCCG TCGGACGGACGACTGTTACTACTGCCCGATCAAGGAGCGACGTGAGGATCAGCCGGGGTCGTTCTGCACCTTATGTCCGG CGGAACAGGATCCGGAGGTGGTATCGTGA
Upstream 100 bases:
>100_bases CCAGGAAGTACTCGAGAGCCTGGAGTCGGTGGAAACGTGTCGAGACCTCGCCTACTTATGCCGCGAGGTCGCCCGCCGTG CCGATCCCAGGGTCCTAGCC
Downstream 100 bases:
>100_bases GGCCTGTGGTGACGGTCGTGGGCAGTCACCCGGTCGGTCACGAGCCCACGCTCAAGGATCGCCTCCTCGAGAAACTCAGG AGGAGGTCCGCCTACGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MLRRDAWRQARFVHPRSYREKILRSLFFALTARINQMRRLDPEEYPEDPIEGYDRFLEIVREYAEDPDYDSPLLLLYESL SAAYAIFLRGEPVHPPGTEFPGVGKVRRTDDCYYCPIKERREDQPGSFCTLCPAEQDPEVVS
Sequences:
>Translated_142_residues MLRRDAWRQARFVHPRSYREKILRSLFFALTARINQMRRLDPEEYPEDPIEGYDRFLEIVREYAEDPDYDSPLLLLYESL SAAYAIFLRGEPVHPPGTEFPGVGKVRRTDDCYYCPIKERREDQPGSFCTLCPAEQDPEVVS >Mature_142_residues MLRRDAWRQARFVHPRSYREKILRSLFFALTARINQMRRLDPEEYPEDPIEGYDRFLEIVREYAEDPDYDSPLLLLYESL SAAYAIFLRGEPVHPPGTEFPGVGKVRRTDDCYYCPIKERREDQPGSFCTLCPAEQDPEVVS
Specific function: Unknown
COG id: COG4066
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0305 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y666_METKA (Q8TXK6)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613951.1 - GeneID: 1476767 - GenomeReviews: AE009439_GR - KEGG: mka:MK0666 - NMPDR: fig|190192.1.peg.664 - OMA: TARINQM - ProtClustDB: PRK01022 - BioCyc: MKAN190192:MK0666-MONOMER - HAMAP: MF_00763 - InterPro: IPR019215 - InterPro: IPR009182 - PIRSF: PIRSF004959
Pfam domain/function: PF09888 DUF2115
EC number: NA
Molecular weight: Translated: 16721; Mature: 16721
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRDAWRQARFVHPRSYREKILRSLFFALTARINQMRRLDPEEYPEDPIEGYDRFLEIV CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH REYAEDPDYDSPLLLLYESLSAAYAIFLRGEPVHPPGTEFPGVGKVRRTDDCYYCPIKER HHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEECCCCEECCCHHH REDQPGSFCTLCPAEQDPEVVS CCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MLRRDAWRQARFVHPRSYREKILRSLFFALTARINQMRRLDPEEYPEDPIEGYDRFLEIV CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH REYAEDPDYDSPLLLLYESLSAAYAIFLRGEPVHPPGTEFPGVGKVRRTDDCYYCPIKER HHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEECCCCEECCCHHH REDQPGSFCTLCPAEQDPEVVS CCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014