| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094085
Identifier: 20094085
GI number: 20094085
Start: 605491
End: 606189
Strand: Direct
Name: 20094085
Synonym: MK0647
Alternate gene names: NA
Gene position: 605491-606189 (Clockwise)
Preceding gene: 20094083
Following gene: 20094089
Centisome position: 35.72
GC content: 68.24
Gene sequence:
>699_bases ATGGCCGGACTACCTACAGCCCGTCCCGACGCCACGCCCGTCCGGGCACCGGAACGCATCCGCGTCCCCGAACCACCGCG GGACCCCGTCGAACAAGCCCGGGTTCTACGCGTGCTCCTCGAAACCGTGAGACGCGGAGTGCTCCCGTTCCTGGGTGCGT CGTATCGGTCGGTGAACGGGAAGGTGTATGGGCCGTACTACGAGGCTCGGTGGAAGCCGCGGAAGGGCGAGCGCGGCCGC ACCATCTACCTGGGCAAGTCCGAGAATGAGAGCGTCCGGTTCCTGGAGGCGTGGCTATGGGAGGTACGCAGGGCCGCCCC ACGGCTGGCCGAACACCGGAAGGCCAAATGGTTCGTCGCACGGGCCGTCCGGAGGGCGCTCGCGGCGCTCCTGGCCCGGT TCGAGGGCGACCCAGAGGAAGCCCTCGAGCTGGCGGGTGAGGTCCTCCGCAAGGTCGGAGGGATACTGACGGGAATGCCG TTCGACCCACTGCGGACGTACTCCAGGCCGAGGGGCGGTAGAAAGCTCCTCAGGATGCTTCTCGGGCGGACCCCTGGCGA GTTCCGCGACGTTCTCCTGGAGATGCTCAGCCCGTGGCCACCCTGGTACTGTCTGACACTGCTCGAACGTCTTCACGGGA GAACCGCGGCGCGCGAGTACCATCGGGCGAGGGTTCCGCGGCCCGGATCGGCGGCATAA
Upstream 100 bases:
>100_bases TCGGGCACCAGACCGCGCCGCCTACTATTTGTGCGTCTGTAACGTAAGGAATTTAAGCCGGCCGTTTGGAGAGTGTCGAC GGCACGCGGGGGAACGGCCG
Downstream 100 bases:
>100_bases GTCGGGAGGAGCGCCGGAGAAACCGGGGAGAAATCACCGGAGTTCCAGGACCGCGGCCACGACCTGTCCCAGGGAAACGC CCCCGTCACCCGCGGGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MAGLPTARPDATPVRAPERIRVPEPPRDPVEQARVLRVLLETVRRGVLPFLGASYRSVNGKVYGPYYEARWKPRKGERGR TIYLGKSENESVRFLEAWLWEVRRAAPRLAEHRKAKWFVARAVRRALAALLARFEGDPEEALELAGEVLRKVGGILTGMP FDPLRTYSRPRGGRKLLRMLLGRTPGEFRDVLLEMLSPWPPWYCLTLLERLHGRTAAREYHRARVPRPGSAA
Sequences:
>Translated_232_residues MAGLPTARPDATPVRAPERIRVPEPPRDPVEQARVLRVLLETVRRGVLPFLGASYRSVNGKVYGPYYEARWKPRKGERGR TIYLGKSENESVRFLEAWLWEVRRAAPRLAEHRKAKWFVARAVRRALAALLARFEGDPEEALELAGEVLRKVGGILTGMP FDPLRTYSRPRGGRKLLRMLLGRTPGEFRDVLLEMLSPWPPWYCLTLLERLHGRTAAREYHRARVPRPGSAA >Mature_231_residues AGLPTARPDATPVRAPERIRVPEPPRDPVEQARVLRVLLETVRRGVLPFLGASYRSVNGKVYGPYYEARWKPRKGERGRT IYLGKSENESVRFLEAWLWEVRRAAPRLAEHRKAKWFVARAVRRALAALLARFEGDPEEALELAGEVLRKVGGILTGMPF DPLRTYSRPRGGRKLLRMLLGRTPGEFRDVLLEMLSPWPPWYCLTLLERLHGRTAAREYHRARVPRPGSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26505; Mature: 26374
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLPTARPDATPVRAPERIRVPEPPRDPVEQARVLRVLLETVRRGVLPFLGASYRSVNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC KVYGPYYEARWKPRKGERGRTIYLGKSENESVRFLEAWLWEVRRAAPRLAEHRKAKWFVA CEECCHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVRRALAALLARFEGDPEEALELAGEVLRKVGGILTGMPFDPLRTYSRPRGGRKLLRML HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHH LGRTPGEFRDVLLEMLSPWPPWYCLTLLERLHGRTAAREYHRARVPRPGSAA HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AGLPTARPDATPVRAPERIRVPEPPRDPVEQARVLRVLLETVRRGVLPFLGASYRSVNG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC KVYGPYYEARWKPRKGERGRTIYLGKSENESVRFLEAWLWEVRRAAPRLAEHRKAKWFVA CEECCHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVRRALAALLARFEGDPEEALELAGEVLRKVGGILTGMPFDPLRTYSRPRGGRKLLRML HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHH LGRTPGEFRDVLLEMLSPWPPWYCLTLLERLHGRTAAREYHRARVPRPGSAA HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA