| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094074
Identifier: 20094074
GI number: 20094074
Start: 597298
End: 597756
Strand: Direct
Name: 20094074
Synonym: MK0636
Alternate gene names: NA
Gene position: 597298-597756 (Clockwise)
Preceding gene: 20094073
Following gene: 20094075
Centisome position: 35.24
GC content: 66.01
Gene sequence:
>459_bases GTGCCTGAGAAGGGCCTCAAACCCTTCCTCACCGGCTTCCGCGAGACCGTCCTCGATCTGACCGACGGTGAGGGCGTCCT CGTGTACTCCGGATGCGCCGGCACGTGCACGCCGTTCGCGGAACTCCTCGCGTTCACGCTGCGGGGGACCGACCTCGAGC AGTACTACTCGATAGACCTCCGCCGCGAGTACCTGCGGATGGAGCTGCGCGACCACGGCTACACGGTCACCGACGAGCGC GAGGAGCTCGAGAGCGCGGACGTCGTCGTCCTCCTCGGCGGTCTCGCCATGCCGATATCCGACGCCACACCCGACGACGC CCGGGAGTTCCTCGAGGAGCTCGGGAACCCACCCCTCGTCGGCGTATGCTTCATGAACATGTTCGAGCGCGCCGGCTGGA CCGACGAGCTCGACTTCCACACAATCATCGACGGCTACCTGGAGGTCACGGTCAAGTGA
Upstream 100 bases:
>100_bases ACCGTGATCGAACTCACGCCCGAAGGTAACATCGACATACTCCGGGAGGGCGCCATGCCGAAGGAGGAAATACTGGAAAC ACTAAGGGGGACGACCTCAG
Downstream 100 bases:
>100_bases TCGAGAAAGAACCGGTACCCCTGCAGGTCGGCGACTACCGTCTGTACTTCCGCCTCTGGGCCCTCGGCGACGCGGACGCC ATCTCGGACGTGCTGTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPEKGLKPFLTGFRETVLDLTDGEGVLVYSGCAGTCTPFAELLAFTLRGTDLEQYYSIDLRREYLRMELRDHGYTVTDER EELESADVVVLLGGLAMPISDATPDDAREFLEELGNPPLVGVCFMNMFERAGWTDELDFHTIIDGYLEVTVK
Sequences:
>Translated_152_residues MPEKGLKPFLTGFRETVLDLTDGEGVLVYSGCAGTCTPFAELLAFTLRGTDLEQYYSIDLRREYLRMELRDHGYTVTDER EELESADVVVLLGGLAMPISDATPDDAREFLEELGNPPLVGVCFMNMFERAGWTDELDFHTIIDGYLEVTVK >Mature_151_residues PEKGLKPFLTGFRETVLDLTDGEGVLVYSGCAGTCTPFAELLAFTLRGTDLEQYYSIDLRREYLRMELRDHGYTVTDERE ELESADVVVLLGGLAMPISDATPDDAREFLEELGNPPLVGVCFMNMFERAGWTDELDFHTIIDGYLEVTVK
Specific function: Unknown
COG id: COG4090
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH862 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009183 [H]
Pfam domain/function: PF09897 DUF2124 [H]
EC number: NA
Molecular weight: Translated: 17068; Mature: 16936
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKGLKPFLTGFRETVLDLTDGEGVLVYSGCAGTCTPFAELLAFTLRGTDLEQYYSIDL CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH RREYLRMELRDHGYTVTDEREELESADVVVLLGGLAMPISDATPDDAREFLEELGNPPLV HHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCH GVCFMNMFERAGWTDELDFHTIIDGYLEVTVK HHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEC >Mature Secondary Structure PEKGLKPFLTGFRETVLDLTDGEGVLVYSGCAGTCTPFAELLAFTLRGTDLEQYYSIDL CCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH RREYLRMELRDHGYTVTDEREELESADVVVLLGGLAMPISDATPDDAREFLEELGNPPLV HHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCH GVCFMNMFERAGWTDELDFHTIIDGYLEVTVK HHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]