| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093940
Identifier: 20093940
GI number: 20093940
Start: 463950
End: 464894
Strand: Direct
Name: 20093940
Synonym: MK0502
Alternate gene names: NA
Gene position: 463950-464894 (Clockwise)
Preceding gene: 20093939
Following gene: 20093941
Centisome position: 27.37
GC content: 51.64
Gene sequence:
>945_bases ATGGAACCTATATTCCAAACACTCTTAGCCCTACTTATAGCCACCCAAACCGGTGTTGAACACGATACCGGATGTTGCAC GGTACTGGTGCACGTACACCACGGATGTGATGTAGTAGCGTACAGGAGGGACGCTAAATTTCCGGCCGAAATACTGATCG TACGCACGGAATGGGCCGGGCGGAGGGCGATTAAGGAGTATAAAATTCAAGGGGGATACTTCTGCCACACCGTGATCACG GAAGACGGGTGGATAGTGACTATAGGAGGACGAGATATTCCCGAAGTGAATAGAAAACTTGAGAAACTTGGGGCCGAGAT AGTATCCAAAGGTCGCATCAAGAAGGATGAAATAGAGAAGGCCGGGGAACTTCTCAAGGAAGCTAGATGGGGACACTTCG TCGTAAAATCCCCAAACGACATCGTCGGAGTAGCATCGTACGACTATAGAATCTCCTCGCCAGAGAGAATAGACATGTTT AAGATTAAGGACGGTGAGTACGTTAAAGTGACGAACAACCCAAGGTACTACGATCGGGGAAGATCCGAAGAGTTCGGTAA AAACCCCATCGACGCCGCCATTAAAATCGCGGGGAAAGACCCGTATGGACTTCACCGACGAGATATAATCACGTACAAGT TAACGGTGGACGAAACGTCAAGCAGCGTCAAAGTTTGGGCTTCCTACGATGGCAGAGCGCTGCTCGGAGGAGCTAGCGGA GAGCCGGACCCGATCCGATTCATGGGCAAGACGATAGCGGCCAACGAAATTCCGAGGGTGCCCCGAAGGAAGCCGTTAGG AGAGGTGATATTACGAGTGTGCAGAGAACACGAGGGCAAGGGAGAGCTACCCAATCCAGCCGCCGTAGCCGCGGCCTTGA TCAGCGGAGCCGTGTTCGTGGCGTTTCTAGGACAGCTGTCGCTCCAGCAGCGAAATCTTTATTAA
Upstream 100 bases:
>100_bases CGACGGTGCCGGATTATCCCGAGACATCGTGAACGCTGCCGCTACCGGAGTTATCGCTGGGCGTGCAGTTGCCGAGCGTA TCGGTTAAGGGGAGACTTAG
Downstream 100 bases:
>100_bases ATACCTGGGGACGACAGAGGCTGGGACGAAGGGCCCGCAGCTCAGTCTGGCAGAGCGCGGCCCTTGCGAGGCCGTGGCCC CGGGTTCAAATCCCGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MEPIFQTLLALLIATQTGVEHDTGCCTVLVHVHHGCDVVAYRRDAKFPAEILIVRTEWAGRRAIKEYKIQGGYFCHTVIT EDGWIVTIGGRDIPEVNRKLEKLGAEIVSKGRIKKDEIEKAGELLKEARWGHFVVKSPNDIVGVASYDYRISSPERIDMF KIKDGEYVKVTNNPRYYDRGRSEEFGKNPIDAAIKIAGKDPYGLHRRDIITYKLTVDETSSSVKVWASYDGRALLGGASG EPDPIRFMGKTIAANEIPRVPRRKPLGEVILRVCREHEGKGELPNPAAVAAALISGAVFVAFLGQLSLQQRNLY
Sequences:
>Translated_314_residues MEPIFQTLLALLIATQTGVEHDTGCCTVLVHVHHGCDVVAYRRDAKFPAEILIVRTEWAGRRAIKEYKIQGGYFCHTVIT EDGWIVTIGGRDIPEVNRKLEKLGAEIVSKGRIKKDEIEKAGELLKEARWGHFVVKSPNDIVGVASYDYRISSPERIDMF KIKDGEYVKVTNNPRYYDRGRSEEFGKNPIDAAIKIAGKDPYGLHRRDIITYKLTVDETSSSVKVWASYDGRALLGGASG EPDPIRFMGKTIAANEIPRVPRRKPLGEVILRVCREHEGKGELPNPAAVAAALISGAVFVAFLGQLSLQQRNLY >Mature_314_residues MEPIFQTLLALLIATQTGVEHDTGCCTVLVHVHHGCDVVAYRRDAKFPAEILIVRTEWAGRRAIKEYKIQGGYFCHTVIT EDGWIVTIGGRDIPEVNRKLEKLGAEIVSKGRIKKDEIEKAGELLKEARWGHFVVKSPNDIVGVASYDYRISSPERIDMF KIKDGEYVKVTNNPRYYDRGRSEEFGKNPIDAAIKIAGKDPYGLHRRDIITYKLTVDETSSSVKVWASYDGRALLGGASG EPDPIRFMGKTIAANEIPRVPRRKPLGEVILRVCREHEGKGELPNPAAVAAALISGAVFVAFLGQLSLQQRNLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34987; Mature: 34987
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPIFQTLLALLIATQTGVEHDTGCCTVLVHVHHGCDVVAYRRDAKFPAEILIVRTEWAG CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEEECCCC RRAIKEYKIQGGYFCHTVITEDGWIVTIGGRDIPEVNRKLEKLGAEIVSKGRIKKDEIEK HHHHHHHCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH AGELLKEARWGHFVVKSPNDIVGVASYDYRISSPERIDMFKIKDGEYVKVTNNPRYYDRG HHHHHHHCCCCEEEEECCCCEEEEEEECEEECCCCCEEEEEECCCCEEEECCCCCCCCCC RSEEFGKNPIDAAIKIAGKDPYGLHRRDIITYKLTVDETSSSVKVWASYDGRALLGGASG CCHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCEEEECCCC EPDPIRFMGKTIAANEIPRVPRRKPLGEVILRVCREHEGKGELPNPAAVAAALISGAVFV CCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH AFLGQLSLQQRNLY HHHHHHHHHHCCCC >Mature Secondary Structure MEPIFQTLLALLIATQTGVEHDTGCCTVLVHVHHGCDVVAYRRDAKFPAEILIVRTEWAG CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEEECCCC RRAIKEYKIQGGYFCHTVITEDGWIVTIGGRDIPEVNRKLEKLGAEIVSKGRIKKDEIEK HHHHHHHCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH AGELLKEARWGHFVVKSPNDIVGVASYDYRISSPERIDMFKIKDGEYVKVTNNPRYYDRG HHHHHHHCCCCEEEEECCCCEEEEEEECEEECCCCCEEEEEECCCCEEEECCCCCCCCCC RSEEFGKNPIDAAIKIAGKDPYGLHRRDIITYKLTVDETSSSVKVWASYDGRALLGGASG CCHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCEEEECCCC EPDPIRFMGKTIAANEIPRVPRRKPLGEVILRVCREHEGKGELPNPAAVAAALISGAVFV CCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH AFLGQLSLQQRNLY HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA