| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093861
Identifier: 20093861
GI number: 20093861
Start: 397587
End: 398081
Strand: Direct
Name: 20093861
Synonym: MK0423
Alternate gene names: NA
Gene position: 397587-398081 (Clockwise)
Preceding gene: 20093860
Following gene: 20093862
Centisome position: 23.46
GC content: 58.79
Gene sequence:
>495_bases GTGGACCTAAGGTACCTAACCAGCGCCATCTCGGTATCGCTGTTCGTTTACTCGGGCATAGACACAGAGCCGCTCCAGTA CGTGACGGCCCAGTGGGTGGAAAGTGTGCTCCACTTAATGGGGCTCACCGTTCCCAAGGCCGGCTACACGTTCCAAGTCG GAACCGTAAGTGCGATGATCGTGAAGGGATGCGTCGTCTGGCCCGCTATCTCGCTGTTCGTAGGATTGATCGTCGCCACT CCCGGCCCATCCGTACTCCGGAAAATCGCCGCCCTCGCCGCGTCCGTAGCACTGCTCACGGCCGGCAACGTGCTAAGGCT GGCGAGCATGTTCTACATGATGGAGGTGTGGGGAGTAGGGTTCCGACTAGCCCACGATGTGATCGGTCAGTTGGTGGGAC TCGCCATCGTCATACTAGCGGCGTGGGTGGCGTTCTATATCGTGCCGGAAACCGAAGATAAGCTCCGTGAAATAATCCCT TGGCCGGGTGAGTGA
Upstream 100 bases:
>100_bases AGACGACCTGCTCATGATGCTATCGGCGGCGTGGGTGATCCAAACCTTCGGAGTCTCGGGCTTAATGCGGCTCCTAGGGC TGATGCCGGGGTGGTGAGGG
Downstream 100 bases:
>100_bases AGTGGGAGAACAATACGACTCGGACCTACATCTACACTCCCAGTACTCGGGCGGTACCTCACCGAGAATGGTGATACGGG AGATAGCACGAGGAGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMIVKGCVVWPAISLFVGLIVAT PGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVGFRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIP WPGE
Sequences:
>Translated_164_residues MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMIVKGCVVWPAISLFVGLIVAT PGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVGFRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIP WPGE >Mature_164_residues MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMIVKGCVVWPAISLFVGLIVAT PGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVGFRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIP WPGE
Specific function: Unknown
COG id: COG4083
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17740; Mature: 17740
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMI CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH VKGCVVWPAISLFVGLIVATPGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH FRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIPWPGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMI CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH VKGCVVWPAISLFVGLIVATPGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH FRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIPWPGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA