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The map label for this gene is cdaR [C]

Identifier: 18311326

GI number: 18311326

Start: 2701079

End: 2702020

Strand: Reverse

Name: cdaR [C]

Synonym: CPE2344

Alternate gene names: 18311326

Gene position: 2702020-2701079 (Counterclockwise)

Preceding gene: 18311327

Following gene: 18311325

Centisome position: 89.13

GC content: 24.63

Gene sequence:

>942_bases
ATGTACAGTTTTTATAAGTTCTTAGAAGAGTTATATTTAAATACTAAAATACCTTTTATAGTTGTTTTGGATGACAAGAA
ATTTGTACTATCAGATTTTGATAATTATGATAATGTTTCTTTAGAATTAGAGGTTAATGGTAAAAAGGGAAAAATAATAA
CTCAAAAGGAATATGAAAGCTGTACTTCTTTATTAAGATATTTAATTGAAAATAAGATTAAAGAAGTTTCAAGTAACAAG
GAAAAACTTATTAGAAAGGCTTTAAATGGAGTTACTATAGACAAAAATATTATTCATAAGGAATTGGGATTTTTAAAAGA
TGATTTCTACATAATTAATGTTTATTTAGCTTCAAACCTCCAAGAAGGTTTAGAACTTGTTAATGAATGCTATGGTAATA
AAAATATAGTTAGCGTTTTAAAAGAGGATAACATAGTAATTATTGGTGCTTTAGAAGATGTTGATGATCACGTTAATAGT
ATAAAGGATTCTATTGACTCAAACCTTTATGTAAAATGTTATATAAGCTATATGAAATTAAATAATATAAATGAAATAAA
AGAGGCTTATGAGATAAATATGTCTAAGATAAATCTTGCAATAAAATATGATTTAGATGAAGTCATTTATGGAGAAAGAG
ATTTACTTTTTGAAACTTTAGTTGATTCCATAGATGATGACTTAAAGATGAAGATGTATGAAGATTTTGGGTTAGGATTT
TCTAAGTTGGATAGAGAGATGATAAAGACTATAGAAACATTTTTTAAGTGTGGACTTAATATAAGTGATGCATCTAAGGA
ATTATATGTACATAGAAATACTCTCATCTACAGATTAGATAAAATTCAGAAGTGTACATCTTATGATATAAGAAATTTTA
ATGAAGCTGTAATCTTTAAAATAGCTTTTTTAATATGGCGTGGTAAAGAAATAAATAAGTAA

Upstream 100 bases:

>100_bases
AAGTTCTACGTTGATGCTAATAAGATTCATATATTCGATAAAGAAACTGAATTAAAATTAGTTTAATCAGCAATAGCTTT
AATATAGAGGGGTAATTAAT

Downstream 100 bases:

>100_bases
GTAATATAATTAAAAGTATATTTATGATAGTAGAAAACCATATCAAAGGAAAGGATTAAATTAACTTTGATATGGTTTTT
ATTTTATGATTAATTTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PucR Family; Carbohydrate Diacid Regulator; PucR Family Transcriptional Regulator; Sugar Diacid Utilization Regulator; Regulator Of Polyketide Synthase Expression; CdaR Family Transcriptional Regulator

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MYSFYKFLEELYLNTKIPFIVVLDDKKFVLSDFDNYDNVSLELEVNGKKGKIITQKEYESCTSLLRYLIENKIKEVSSNK
EKLIRKALNGVTIDKNIIHKELGFLKDDFYIINVYLASNLQEGLELVNECYGNKNIVSVLKEDNIVIIGALEDVDDHVNS
IKDSIDSNLYVKCYISYMKLNNINEIKEAYEINMSKINLAIKYDLDEVIYGERDLLFETLVDSIDDDLKMKMYEDFGLGF
SKLDREMIKTIETFFKCGLNISDASKELYVHRNTLIYRLDKIQKCTSYDIRNFNEAVIFKIAFLIWRGKEINK

Sequences:

>Translated_313_residues
MYSFYKFLEELYLNTKIPFIVVLDDKKFVLSDFDNYDNVSLELEVNGKKGKIITQKEYESCTSLLRYLIENKIKEVSSNK
EKLIRKALNGVTIDKNIIHKELGFLKDDFYIINVYLASNLQEGLELVNECYGNKNIVSVLKEDNIVIIGALEDVDDHVNS
IKDSIDSNLYVKCYISYMKLNNINEIKEAYEINMSKINLAIKYDLDEVIYGERDLLFETLVDSIDDDLKMKMYEDFGLGF
SKLDREMIKTIETFFKCGLNISDASKELYVHRNTLIYRLDKIQKCTSYDIRNFNEAVIFKIAFLIWRGKEINK
>Mature_313_residues
MYSFYKFLEELYLNTKIPFIVVLDDKKFVLSDFDNYDNVSLELEVNGKKGKIITQKEYESCTSLLRYLIENKIKEVSSNK
EKLIRKALNGVTIDKNIIHKELGFLKDDFYIINVYLASNLQEGLELVNECYGNKNIVSVLKEDNIVIIGALEDVDDHVNS
IKDSIDSNLYVKCYISYMKLNNINEIKEAYEINMSKINLAIKYDLDEVIYGERDLLFETLVDSIDDDLKMKMYEDFGLGF
SKLDREMIKTIETFFKCGLNISDASKELYVHRNTLIYRLDKIQKCTSYDIRNFNEAVIFKIAFLIWRGKEINK

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36625; Mature: 36625

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSFYKFLEELYLNTKIPFIVVLDDKKFVLSDFDNYDNVSLELEVNGKKGKIITQKEYES
CCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHHH
CTSLLRYLIENKIKEVSSNKEKLIRKALNGVTIDKNIIHKELGFLKDDFYIINVYLASNL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEHHHH
QEGLELVNECYGNKNIVSVLKEDNIVIIGALEDVDDHVNSIKDSIDSNLYVKCYISYMKL
HHHHHHHHHHHCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEHHH
NNINEIKEAYEINMSKINLAIKYDLDEVIYGERDLLFETLVDSIDDDLKMKMYEDFGLGF
CCHHHHHHHHHCCHHHEEEEEEECHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCH
SKLDREMIKTIETFFKCGLNISDASKELYVHRNTLIYRLDKIQKCTSYDIRNFNEAVIFK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IAFLIWRGKEINK
HHHHHHCCCCCCC
>Mature Secondary Structure
MYSFYKFLEELYLNTKIPFIVVLDDKKFVLSDFDNYDNVSLELEVNGKKGKIITQKEYES
CCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHHH
CTSLLRYLIENKIKEVSSNKEKLIRKALNGVTIDKNIIHKELGFLKDDFYIINVYLASNL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEHHHH
QEGLELVNECYGNKNIVSVLKEDNIVIIGALEDVDDHVNSIKDSIDSNLYVKCYISYMKL
HHHHHHHHHHHCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEHHH
NNINEIKEAYEINMSKINLAIKYDLDEVIYGERDLLFETLVDSIDDDLKMKMYEDFGLGF
CCHHHHHHHHHCCHHHEEEEEEECHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCH
SKLDREMIKTIETFFKCGLNISDASKELYVHRNTLIYRLDKIQKCTSYDIRNFNEAVIFK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IAFLIWRGKEINK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA