The gene/protein map for NC_003366 is currently unavailable.
Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is cycB [H]

Identifier: 18311325

GI number: 18311325

Start: 2699392

End: 2700618

Strand: Reverse

Name: cycB [H]

Synonym: CPE2343

Alternate gene names: 18311325

Gene position: 2700618-2699392 (Counterclockwise)

Preceding gene: 18311326

Following gene: 18311324

Centisome position: 89.09

GC content: 33.25

Gene sequence:

>1227_bases
ATGGGAAAACGTACAAAAATTCTAGCAACTGTAATGGCTGCAACAATGTTATTTGCAGGATCATTAGTAGGATGTGGAGG
GAAAGCTGATTCAGGTAGTACTGATGGTTCAGGAAAAGAACTTACAGTATGGTCACATTTAACTACTCCAGAAGTAGAAG
AATTAAATAAAATAGCTTCAAAATGGGGAGAAGAAAATGGAGTTAAAGTTAAGGTTGTAGAAGACAAATCAGAAATGCAA
GCTTACATACAAGCTGCAAATAGTTCAAAGGGACCAGATATAATGTTTGGACTAGCTCATGATAACTTAGGAACATTCCA
AAAGGCTGGACTTTTAGCAGAGGTTCCAGAAGGAATTATAAATGATTCTGATTATGCATCACATCAAGTTTTAGATGCTG
TAACAATAGGTGGAAAAAGATATGCAGTTCCAATAGCACAAGAAACATCAGCTCTTTTCTATAATAAGGATAAAGTTAAA
GAAGTTCCAAAAACCATGGAAGATTTAGTTAAGGTTGCAAAAGATGGAGTTGGATTTGAATATGATATTAATAATTTCTA
TCCTACTTATGGATTTATAGCAGCAGATGGAGGATATGTTTATAAAGATAATAATGGAACTCTTGACCCAACTGATATCG
GATTAGGAACACCAGGAGCTATAAAAGGATATCAATTTGTTCAAGATTTAGTTCAAAAAGATAAATTAATGCCAGCTGAT
ATAACTGGAGATATAGCAAAGGGAGATTTCTTATCTAAGAAATCAGGATTTTATATTTCAGGACCTTGGGATGTATCAGC
ATTTAAAGATGGAGGAGTAAATTTTGGAGTAGCTCCAATACCAACATTATTTGGAAAACAAGTACCAACTTTCTTAGGTG
TTCAAACTGCTTTCGTAAGTGAAAAATCTCAGAATAAAGATTTAGCATGGAAATTAGTTAAATACTTATCAGAAAATTCA
GGTGATGTATTGTTAAGTAAAGGTAACAGAATTCCAGTATTAAATAAATACTTAGATAGTGCAGATTTCAAAAATAATGA
GTATATGAGTGCTTTCGCAGAACAAGCTAAATTCGCTACACCAATGCCTAATATACCAGAAATTCAAGCTATGTGGGGAC
CTGCTGGAGCTAACTTACAATTATTAACTTCAGGACAAGTTACACCAGAAAAATGTGCTGAAATGACAGTAGAACAAATT
AAACAAGGTATATCTCAACAAAAATAA

Upstream 100 bases:

>100_bases
TATGAGATATTTTTTTATAATATTTTGGTATCGTTTCCGAGAGTGAGAATGTAAATTTATAGCTTTTTAGCTAATTAAAA
GTTATGAGGGGGATTTTATA

Downstream 100 bases:

>100_bases
TTAAGAAGTTTTTATAGGGGGATGTAAATTCCCCCTTATTTATAGAAGTTTATATTAAAAAGAGGTATTTGAGGAGGCGA
GATATAATGCAAGTTACGAG

Product: maltose ABC transporter

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MGKRTKILATVMAATMLFAGSLVGCGGKADSGSTDGSGKELTVWSHLTTPEVEELNKIASKWGEENGVKVKVVEDKSEMQ
AYIQAANSSKGPDIMFGLAHDNLGTFQKAGLLAEVPEGIINDSDYASHQVLDAVTIGGKRYAVPIAQETSALFYNKDKVK
EVPKTMEDLVKVAKDGVGFEYDINNFYPTYGFIAADGGYVYKDNNGTLDPTDIGLGTPGAIKGYQFVQDLVQKDKLMPAD
ITGDIAKGDFLSKKSGFYISGPWDVSAFKDGGVNFGVAPIPTLFGKQVPTFLGVQTAFVSEKSQNKDLAWKLVKYLSENS
GDVLLSKGNRIPVLNKYLDSADFKNNEYMSAFAEQAKFATPMPNIPEIQAMWGPAGANLQLLTSGQVTPEKCAEMTVEQI
KQGISQQK

Sequences:

>Translated_408_residues
MGKRTKILATVMAATMLFAGSLVGCGGKADSGSTDGSGKELTVWSHLTTPEVEELNKIASKWGEENGVKVKVVEDKSEMQ
AYIQAANSSKGPDIMFGLAHDNLGTFQKAGLLAEVPEGIINDSDYASHQVLDAVTIGGKRYAVPIAQETSALFYNKDKVK
EVPKTMEDLVKVAKDGVGFEYDINNFYPTYGFIAADGGYVYKDNNGTLDPTDIGLGTPGAIKGYQFVQDLVQKDKLMPAD
ITGDIAKGDFLSKKSGFYISGPWDVSAFKDGGVNFGVAPIPTLFGKQVPTFLGVQTAFVSEKSQNKDLAWKLVKYLSENS
GDVLLSKGNRIPVLNKYLDSADFKNNEYMSAFAEQAKFATPMPNIPEIQAMWGPAGANLQLLTSGQVTPEKCAEMTVEQI
KQGISQQK
>Mature_407_residues
GKRTKILATVMAATMLFAGSLVGCGGKADSGSTDGSGKELTVWSHLTTPEVEELNKIASKWGEENGVKVKVVEDKSEMQA
YIQAANSSKGPDIMFGLAHDNLGTFQKAGLLAEVPEGIINDSDYASHQVLDAVTIGGKRYAVPIAQETSALFYNKDKVKE
VPKTMEDLVKVAKDGVGFEYDINNFYPTYGFIAADGGYVYKDNNGTLDPTDIGLGTPGAIKGYQFVQDLVQKDKLMPADI
TGDIAKGDFLSKKSGFYISGPWDVSAFKDGGVNFGVAPIPTLFGKQVPTFLGVQTAFVSEKSQNKDLAWKLVKYLSENSG
DVLLSKGNRIPVLNKYLDSADFKNNEYMSAFAEQAKFATPMPNIPEIQAMWGPAGANLQLLTSGQVTPEKCAEMTVEQIK
QGISQQK

Specific function: Binding protein for cyclodextrin; involved in its cellular uptake. Interacts with all natural cyclodextrins:alpha, beta and gamma [H]

COG id: COG2182

COG function: function code G; Maltose-binding periplasmic proteins/domains

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790466, Length=374, Percent_Identity=32.3529411764706, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006060
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43980; Mature: 43849

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRTKILATVMAATMLFAGSLVGCGGKADSGSTDGSGKELTVWSHLTTPEVEELNKIAS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
KWGEENGVKVKVVEDKSEMQAYIQAANSSKGPDIMFGLAHDNLGTFQKAGLLAEVPEGII
HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHCCHHHC
NDSDYASHQVLDAVTIGGKRYAVPIAQETSALFYNKDKVKEVPKTMEDLVKVAKDGVGFE
CCCCHHHHHHHHHEEECCCEEEEEECCCCCHHEECHHHHHHHHHHHHHHHHHHHCCCCEE
YDINNFYPTYGFIAADGGYVYKDNNGTLDPTDIGLGTPGAIKGYQFVQDLVQKDKLMPAD
EECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
ITGDIAKGDFLSKKSGFYISGPWDVSAFKDGGVNFGVAPIPTLFGKQVPTFLGVQTAFVS
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHC
EKSQNKDLAWKLVKYLSENSGDVLLSKGNRIPVLNKYLDSADFKNNEYMSAFAEQAKFAT
CCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PMPNIPEIQAMWGPAGANLQLLTSGQVTPEKCAEMTVEQIKQGISQQK
CCCCCCCHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKRTKILATVMAATMLFAGSLVGCGGKADSGSTDGSGKELTVWSHLTTPEVEELNKIAS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
KWGEENGVKVKVVEDKSEMQAYIQAANSSKGPDIMFGLAHDNLGTFQKAGLLAEVPEGII
HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHCCHHHC
NDSDYASHQVLDAVTIGGKRYAVPIAQETSALFYNKDKVKEVPKTMEDLVKVAKDGVGFE
CCCCHHHHHHHHHEEECCCEEEEEECCCCCHHEECHHHHHHHHHHHHHHHHHHHCCCCEE
YDINNFYPTYGFIAADGGYVYKDNNGTLDPTDIGLGTPGAIKGYQFVQDLVQKDKLMPAD
EECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
ITGDIAKGDFLSKKSGFYISGPWDVSAFKDGGVNFGVAPIPTLFGKQVPTFLGVQTAFVS
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHC
EKSQNKDLAWKLVKYLSENSGDVLLSKGNRIPVLNKYLDSADFKNNEYMSAFAEQAKFAT
CCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PMPNIPEIQAMWGPAGANLQLLTSGQVTPEKCAEMTVEQIKQGISQQK
CCCCCCCHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]