| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is malF [H]
Identifier: 18311324
GI number: 18311324
Start: 2698352
End: 2699305
Strand: Reverse
Name: malF [H]
Synonym: CPE2342
Alternate gene names: 18311324
Gene position: 2699305-2698352 (Counterclockwise)
Preceding gene: 18311325
Following gene: 18311323
Centisome position: 89.04
GC content: 30.4
Gene sequence:
>954_bases ATGCAAGTTACGAGTGATAGAAGGGCAGATAAAAAGCAGAAAAGGTTAAAAGATACAATAAAAGCAATGCCATATTTGTT ACCAGCATTAATATCAATAATTATATTTACTATTATTCCTATAGTTTACACTGTAGTAATAGCATTTACTGATTACACAA TGTATTCACAAGGACATATTAAATTTGTAGGGTTTGCAAATTTTATAGAGGTTTTAACAGGACCATTTAAAGAAATATTT TTACCTGTTTTTGGATGGAATATAATTTTTGCAGTAGTATCAACTGCGGGTACATTTTTCTTAGGATTAATAGTTGCCAT GGCAGTAAATAACCCTAATATAAAAGAAAAATCAGTTTATAGGGCAATACTTATAATTCCATGGGCTTTACCAGCTACAG TAGCAATACTTTCATGGCAAGGTCTTTTAAATGGAAGTTATGGAGCAATAAATAATTTATTATTAAATTTACATTTAATA TCAAATCCAATTCCATGGTTAACAGATCCAACATGGGCAAGGGTAGCACTTATAATAGTTAATATATGGTTAGGATTCCC TTATATGATGAATGTTTGTTTAGGAGCCTTAGGAGCAATTCCTGATAGTTACTATGAAGCTGCAGATGTTGATGGTGCTA GTAAATGGCTTCAATTTAGAAAAATAACATTGCCATCATTAGCTCAAATATCCTATCCACTATTAATTTCATCATTTGCA TTTAACTTTAATAACTTTGGATCAGCATTCTTAATCACTAAAGGTGGTCCACCAAGAATGTCTACTCAATTCGCTGGTTA TACAGATATTCTTGCATCTGTAAACTATAAATTATCAACACAGTTTGGTAGATTTGAAATAGCATCTGCAATTAGTATAA TAATATTCTTAATTTTAGGAACTATATCATACTATCAAATGAAATTAAGTGGACAATTCGAGGAGGTAGAATAG
Upstream 100 bases:
>100_bases CTCAACAAAAATAATTAAGAAGTTTTTATAGGGGGATGTAAATTCCCCCTTATTTATAGAAGTTTATATTAAAAAGAGGT ATTTGAGGAGGCGAGATATA
Downstream 100 bases:
>100_bases AATGCAAAGTAAAGTACAAAAAAAGAGCGGAATAGTAACTACCTTAGAACTTAAATATGAAAGAAAATTAAGACCTGCTG AAAGAAGAATGGCATGGATA
Product: maltose ABC transporter
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MQVTSDRRADKKQKRLKDTIKAMPYLLPALISIIIFTIIPIVYTVVIAFTDYTMYSQGHIKFVGFANFIEVLTGPFKEIF LPVFGWNIIFAVVSTAGTFFLGLIVAMAVNNPNIKEKSVYRAILIIPWALPATVAILSWQGLLNGSYGAINNLLLNLHLI SNPIPWLTDPTWARVALIIVNIWLGFPYMMNVCLGALGAIPDSYYEAADVDGASKWLQFRKITLPSLAQISYPLLISSFA FNFNNFGSAFLITKGGPPRMSTQFAGYTDILASVNYKLSTQFGRFEIASAISIIIFLILGTISYYQMKLSGQFEEVE
Sequences:
>Translated_317_residues MQVTSDRRADKKQKRLKDTIKAMPYLLPALISIIIFTIIPIVYTVVIAFTDYTMYSQGHIKFVGFANFIEVLTGPFKEIF LPVFGWNIIFAVVSTAGTFFLGLIVAMAVNNPNIKEKSVYRAILIIPWALPATVAILSWQGLLNGSYGAINNLLLNLHLI SNPIPWLTDPTWARVALIIVNIWLGFPYMMNVCLGALGAIPDSYYEAADVDGASKWLQFRKITLPSLAQISYPLLISSFA FNFNNFGSAFLITKGGPPRMSTQFAGYTDILASVNYKLSTQFGRFEIASAISIIIFLILGTISYYQMKLSGQFEEVE >Mature_317_residues MQVTSDRRADKKQKRLKDTIKAMPYLLPALISIIIFTIIPIVYTVVIAFTDYTMYSQGHIKFVGFANFIEVLTGPFKEIF LPVFGWNIIFAVVSTAGTFFLGLIVAMAVNNPNIKEKSVYRAILIIPWALPATVAILSWQGLLNGSYGAINNLLLNLHLI SNPIPWLTDPTWARVALIIVNIWLGFPYMMNVCLGALGAIPDSYYEAADVDGASKWLQFRKITLPSLAQISYPLLISSFA FNFNNFGSAFLITKGGPPRMSTQFAGYTDILASVNYKLSTQFGRFEIASAISIIIFLILGTISYYQMKLSGQFEEVE
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=258, Percent_Identity=42.6356589147287, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1787570, Length=263, Percent_Identity=27.7566539923954, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35300; Mature: 35300
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVTSDRRADKKQKRLKDTIKAMPYLLPALISIIIFTIIPIVYTVVIAFTDYTMYSQGHI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCE KFVGFANFIEVLTGPFKEIFLPVFGWNIIFAVVSTAGTFFLGLIVAMAVNNPNIKEKSVY EEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAILIIPWALPATVAILSWQGLLNGSYGAINNLLLNLHLISNPIPWLTDPTWARVALIIV EEHEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHH NIWLGFPYMMNVCLGALGAIPDSYYEAADVDGASKWLQFRKITLPSLAQISYPLLISSFA HHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH FNFNNFGSAFLITKGGPPRMSTQFAGYTDILASVNYKLSTQFGRFEIASAISIIIFLILG HCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHH TISYYQMKLSGQFEEVE HHHHHHHEECCCCCCCC >Mature Secondary Structure MQVTSDRRADKKQKRLKDTIKAMPYLLPALISIIIFTIIPIVYTVVIAFTDYTMYSQGHI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCE KFVGFANFIEVLTGPFKEIFLPVFGWNIIFAVVSTAGTFFLGLIVAMAVNNPNIKEKSVY EEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAILIIPWALPATVAILSWQGLLNGSYGAINNLLLNLHLISNPIPWLTDPTWARVALIIV EEHEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHH NIWLGFPYMMNVCLGALGAIPDSYYEAADVDGASKWLQFRKITLPSLAQISYPLLISSFA HHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH FNFNNFGSAFLITKGGPPRMSTQFAGYTDILASVNYKLSTQFGRFEIASAISIIIFLILG HCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHH TISYYQMKLSGQFEEVE HHHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]