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The map label for this gene is yhcS [H]

Identifier: 18311297

GI number: 18311297

Start: 2661982

End: 2662659

Strand: Reverse

Name: yhcS [H]

Synonym: CPE2315

Alternate gene names: 18311297

Gene position: 2662659-2661982 (Counterclockwise)

Preceding gene: 18311299

Following gene: 18311296

Centisome position: 87.84

GC content: 31.71

Gene sequence:

>678_bases
GTGTGGGGAAAAATTAGAAATGTATTAGGTATTCTTTTAATAGTGGCAGGAGTATCACTTATTGGAGTAACTATTTGGAT
GAAATATGATACTTATAGACAGCAGCAAGCTGTTTTAGATAGTTTTAGAAATTTACAGTTTGATGTTCCAGAGGGTGAAA
AGAAAGATGCTGATGTGTTAGAAGAAGAAAATACTAAGGAAAATACTAAAGAAAATAGCGATGAAAAGAATAAAGCTGAT
AAGGTTGAAGTTGAAAAAGACAAAAAGCCAGAAAAAGCACAACTTGAAGAGGGAAAAGGAATAGGTATTTTAAATATTCC
AAAGATAAACTTAGAAATAGGTATAATAGAAGGCGTTAGCTATGAAGATATAAAGTATGTAGTAGGTCATTTTCCTGGGT
CACCAATGCCAGGGGAAAAAGGTAATTTCTCCATAGCAGGACATAGAATATCATATTTTGGACAAGCTTTTAAGGATATT
GATAAGCTTGAAAAAGGGGATAAAGTCAAAGTTACTTACAATGGAAAAGAATATACTTATGAAATAACTGATATGTATGA
GGTTACTCCAAATGAAACTGAGGCTTTAAATCCAACAAAAGATGCTACTATAACTATAGTTACATGTACAACTGACGCTA
AAAATAGGGTTATAGTAAAAGGAAAGTTAGTGGAATAA

Upstream 100 bases:

>100_bases
GAATAGCTTATAATAATTGATTAGAAATAATTTTAGTCTGTAGTAATATTATTAGAAGCTTTATGTAAAAGGGATTTAAA
TAGAAAGGGTGAATTGAGAA

Downstream 100 bases:

>100_bases
GACTGGGTTTTTGCCTTAGTCTTATTTTTTATAAAATATACATAAAGGAGTGTCGCTTGAGTGAGTGAAGTAACTTTTAG
AAAAGATAAATATATGTTTT

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MWGKIRNVLGILLIVAGVSLIGVTIWMKYDTYRQQQAVLDSFRNLQFDVPEGEKKDADVLEEENTKENTKENSDEKNKAD
KVEVEKDKKPEKAQLEEGKGIGILNIPKINLEIGIIEGVSYEDIKYVVGHFPGSPMPGEKGNFSIAGHRISYFGQAFKDI
DKLEKGDKVKVTYNGKEYTYEITDMYEVTPNETEALNPTKDATITIVTCTTDAKNRVIVKGKLVE

Sequences:

>Translated_225_residues
MWGKIRNVLGILLIVAGVSLIGVTIWMKYDTYRQQQAVLDSFRNLQFDVPEGEKKDADVLEEENTKENTKENSDEKNKAD
KVEVEKDKKPEKAQLEEGKGIGILNIPKINLEIGIIEGVSYEDIKYVVGHFPGSPMPGEKGNFSIAGHRISYFGQAFKDI
DKLEKGDKVKVTYNGKEYTYEITDMYEVTPNETEALNPTKDATITIVTCTTDAKNRVIVKGKLVE
>Mature_225_residues
MWGKIRNVLGILLIVAGVSLIGVTIWMKYDTYRQQQAVLDSFRNLQFDVPEGEKKDADVLEEENTKENTKENSDEKNKAD
KVEVEKDKKPEKAQLEEGKGIGILNIPKINLEIGIIEGVSYEDIKYVVGHFPGSPMPGEKGNFSIAGHRISYFGQAFKDI
DKLEKGDKVKVTYNGKEYTYEITDMYEVTPNETEALNPTKDATITIVTCTTDAKNRVIVKGKLVE

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 25279; Mature: 25279

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGKIRNVLGILLIVAGVSLIGVTIWMKYDTYRQQQAVLDSFRNLQFDVPEGEKKDADVL
CCHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCEEECCCCCCCCCHHH
EEENTKENTKENSDEKNKADKVEVEKDKKPEKAQLEEGKGIGILNIPKINLEIGIIEGVS
HCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCCCCEEEECCEEEEEEEEECCCC
YEDIKYVVGHFPGSPMPGEKGNFSIAGHRISYFGQAFKDIDKLEKGDKVKVTYNGKEYTY
HHHHHHHEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEE
EITDMYEVTPNETEALNPTKDATITIVTCTTDAKNRVIVKGKLVE
EEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MWGKIRNVLGILLIVAGVSLIGVTIWMKYDTYRQQQAVLDSFRNLQFDVPEGEKKDADVL
CCHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCEEECCCCCCCCCHHH
EEENTKENTKENSDEKNKADKVEVEKDKKPEKAQLEEGKGIGILNIPKINLEIGIIEGVS
HCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCCCCEEEECCEEEEEEEEECCCC
YEDIKYVVGHFPGSPMPGEKGNFSIAGHRISYFGQAFKDIDKLEKGDKVKVTYNGKEYTY
HHHHHHHEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEE
EITDMYEVTPNETEALNPTKDATITIVTCTTDAKNRVIVKGKLVE
EEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]