| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is celA [H]
Identifier: 18311211
GI number: 18311211
Start: 2550854
End: 2551183
Strand: Reverse
Name: celA [H]
Synonym: CPE2229
Alternate gene names: 18311211
Gene position: 2551183-2550854 (Counterclockwise)
Preceding gene: 18311212
Following gene: 18311210
Centisome position: 84.16
GC content: 26.36
Gene sequence:
>330_bases ATGAAAAAAGTAGTATTATTATGTACACTAGGAATGTCTACATCTTTATTAGTTTCTAAAATGAGAAAAGCTGCAAATGA ATTAGGGATTGATTGTTCTATAGTTGCAATAGGAGAATATGAGCTTAAAAAATATGAAAAAGAGGCAGATATAATAATGT TAGGACCTCAAGTAAGGTATTTATTTAATAGTTTAAGAAAAAAAGTAGATAGTAATATACCAATAACTCTTATAAATAGT GCAGATTATGGAACGATGAATGGTAATAAGATTTTAAATCAAGCCTTAGCACTAATGGATAATAAGGAATTATCCACAAA TAATTTGTAA
Upstream 100 bases:
>100_bases AATAGTAGTAATAGTCATTTTAAATTAAATATATATTTTATCTAAAATAAAAAAATATATGGTGTAAGCAAAGAAAGGTA TTAATTTAGGGGGATTATAT
Downstream 100 bases:
>100_bases GAAATTTTAATAGGGGATCGTATAAGAAGTCTTTTTAAAAAGGGCCTTATACGATTCTTATTTATATATTTAATAAATTG AAAATTTAAATATATATATA
Product: PTS system protein
Products: NA
Alternate protein names: EIIB-Cel; PTS system cellobiose-specific EIIB component [H]
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKKVVLLCTLGMSTSLLVSKMRKAANELGIDCSIVAIGEYELKKYEKEADIIMLGPQVRYLFNSLRKKVDSNIPITLINS ADYGTMNGNKILNQALALMDNKELSTNNL
Sequences:
>Translated_109_residues MKKVVLLCTLGMSTSLLVSKMRKAANELGIDCSIVAIGEYELKKYEKEADIIMLGPQVRYLFNSLRKKVDSNIPITLINS ADYGTMNGNKILNQALALMDNKELSTNNL >Mature_109_residues MKKVVLLCTLGMSTSLLVSKMRKAANELGIDCSIVAIGEYELKKYEKEADIIMLGPQVRYLFNSLRKKVDSNIPITLINS ADYGTMNGNKILNQALALMDNKELSTNNL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=91, Percent_Identity=37.3626373626374, Blast_Score=65, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014350 - InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 12097; Mature: 12097
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVVLLCTLGMSTSLLVSKMRKAANELGIDCSIVAIGEYELKKYEKEADIIMLGPQVRY CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCEEEECCHHHH LFNSLRKKVDSNIPITLINSADYGTMNGNKILNQALALMDNKELSTNNL HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKVVLLCTLGMSTSLLVSKMRKAANELGIDCSIVAIGEYELKKYEKEADIIMLGPQVRY CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCEEEECCHHHH LFNSLRKKVDSNIPITLINSADYGTMNGNKILNQALALMDNKELSTNNL HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]