Click here to switch to the map view.

The map label for this gene is ytfP [H]

Identifier: 17547877

GI number: 17547877

Start: 3412687

End: 3413964

Strand: Direct

Name: ytfP [H]

Synonym: RSc3158

Alternate gene names: 17547877

Gene position: 3412687-3413964 (Clockwise)

Preceding gene: 17547875

Following gene: 17547881

Centisome position: 91.83

GC content: 69.17

Gene sequence:

>1278_bases
ATGTCCGAACCGCACAACGCTCCCCTGGTCGCCGTGATCGGCGCCGGCCCTGCCGGGCTGATGGCCGCCGAAGTCCTGTC
CCGCGCAGGCGTGCGTGTCGAGGTGTTCGACTCCATGCCGTCGGCTGGCCGCAAGTTCCTGCTGGCGGGCATCGGCGGGA
TGAACATCACGCACTCGGAAGCGTTCGACGCGTTTCTCGGGCGTTATCGTGCGCGCCGCGAGCAACTCGCGCCGCTCATC
GACCGCTTCAGCCCCGACGCGCTGCGCGACTGGGTGCATGGGCTCGGGATCGAGACGTTCATCGGCAGTTCGGGCCGCGT
GTTTCCGACCGACATGAAAGCGGCGCCGTTGCTGCGAGCGTGGCTGCATCGGCTGCGCGAGGCCGGCGTGAAGTTGCATA
TGCGGCACCGGTGGGCCGGTTGGAGCGCCGCACCGTCCGGTCAGGCCGATCAACCTGAGGCGCTGCGCTTCGAAACCCCT
GACGGGGAGCGCCTCGTGCACGCCGATGCCGTGGTGCTTGCGATGGGCGGCGGCAGCTGGCCGCGCCTCGGCTCCGATGG
CGCATGGGTGCCGCGCCTGGAAGCACGCGGCGTGCAAGTGCTGCCGCTCAAGCCCGCCAACTGCGGGTTCGACGCCGACT
GGAGCGCGCATTTCCGGGAGCGCTTCGCGGGGCAGCCGGTGAAGTCCGTCGCGATCGGCGTCGCGTCCGGCGACGATGGC
GCGCGGCAGTTCCGCCCGGGCGAGTTCCTCGTCACGCAGAGCGGCATCGAAGGCAGCCTGGTTTATGCGTTGTCCGCGCC
GATCCGCGATGCACTCGAAGCCGGCGGCGAAATCACGATCTGGCTCGATCTGGCGCCCGGCTGGAGTGCGCAACGCGTCG
CCGATGCGTTGATGCGGCCACGCGGCGCTCGCTCGATGTCGAGTCATCTGCAGAGCAAGTTGAATATCACGGGCGTGAAG
CTCGGGCTGCTGCGCGAATGTCTGTCGAAAGACGCATTCGCCGATCTCGCGCAGCTTGCGCAAGCGATCAAGGCACTGCC
GCTGCGGCTCACGCGCGCCCGGCCGATCGACGAAGCGATCAGCAGCGCGGGCGGCGTCGCGTTCGAAGCGCTCGATGCGA
ATCTGATGATCGCGCGCTTGCCCGGCGTGTTCTGCGCGGGCGAGATGCTCGATTGGGAGGCCCCGACGGGCGGCTACCTG
CTGACGGCGTGTTTTGCGAGTGGAGCCGCCGCCGGGCACGGCGTGCTCGCGTATCTGGCAACGGCGGCGCGCGGATGA

Upstream 100 bases:

>100_bases
TGGGACAATAGCGCCCCGCGCGTGCGTCCCAAGCGTCACCCGTTCCGCGTCATGACGCTCGTGGCGGGCGCCACAGCGTC
CCTCTCTGATCCACCGCCGC

Downstream 100 bases:

>100_bases
AGCGCTCGCTCAGACTTGCCGACAGGATGCATCGATTGCACTAGCGCGCTTTCAATCGCCACAACGACGTGACCTCGGCG
GCGCGTGCCTGATAGAGCGG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSEPHNAPLVAVIGAGPAGLMAAEVLSRAGVRVEVFDSMPSAGRKFLLAGIGGMNITHSEAFDAFLGRYRARREQLAPLI
DRFSPDALRDWVHGLGIETFIGSSGRVFPTDMKAAPLLRAWLHRLREAGVKLHMRHRWAGWSAAPSGQADQPEALRFETP
DGERLVHADAVVLAMGGGSWPRLGSDGAWVPRLEARGVQVLPLKPANCGFDADWSAHFRERFAGQPVKSVAIGVASGDDG
ARQFRPGEFLVTQSGIEGSLVYALSAPIRDALEAGGEITIWLDLAPGWSAQRVADALMRPRGARSMSSHLQSKLNITGVK
LGLLRECLSKDAFADLAQLAQAIKALPLRLTRARPIDEAISSAGGVAFEALDANLMIARLPGVFCAGEMLDWEAPTGGYL
LTACFASGAAAGHGVLAYLATAARG

Sequences:

>Translated_425_residues
MSEPHNAPLVAVIGAGPAGLMAAEVLSRAGVRVEVFDSMPSAGRKFLLAGIGGMNITHSEAFDAFLGRYRARREQLAPLI
DRFSPDALRDWVHGLGIETFIGSSGRVFPTDMKAAPLLRAWLHRLREAGVKLHMRHRWAGWSAAPSGQADQPEALRFETP
DGERLVHADAVVLAMGGGSWPRLGSDGAWVPRLEARGVQVLPLKPANCGFDADWSAHFRERFAGQPVKSVAIGVASGDDG
ARQFRPGEFLVTQSGIEGSLVYALSAPIRDALEAGGEITIWLDLAPGWSAQRVADALMRPRGARSMSSHLQSKLNITGVK
LGLLRECLSKDAFADLAQLAQAIKALPLRLTRARPIDEAISSAGGVAFEALDANLMIARLPGVFCAGEMLDWEAPTGGYL
LTACFASGAAAGHGVLAYLATAARG
>Mature_424_residues
SEPHNAPLVAVIGAGPAGLMAAEVLSRAGVRVEVFDSMPSAGRKFLLAGIGGMNITHSEAFDAFLGRYRARREQLAPLID
RFSPDALRDWVHGLGIETFIGSSGRVFPTDMKAAPLLRAWLHRLREAGVKLHMRHRWAGWSAAPSGQADQPEALRFETPD
GERLVHADAVVLAMGGGSWPRLGSDGAWVPRLEARGVQVLPLKPANCGFDADWSAHFRERFAGQPVKSVAIGVASGDDGA
RQFRPGEFLVTQSGIEGSLVYALSAPIRDALEAGGEITIWLDLAPGWSAQRVADALMRPRGARSMSSHLQSKLNITGVKL
GLLRECLSKDAFADLAQLAQAIKALPLRLTRARPIDEAISSAGGVAFEALDANLMIARLPGVFCAGEMLDWEAPTGGYLL
TACFASGAAAGHGVLAYLATAARG

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 45135; Mature: 45004

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPHNAPLVAVIGAGPAGLMAAEVLSRAGVRVEVFDSMPSAGRKFLLAGIGGMNITHSE
CCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCHHH
AFDAFLGRYRARREQLAPLIDRFSPDALRDWVHGLGIETFIGSSGRVFPTDMKAAPLLRA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEECCCCCCCCCCCCHHHHHHH
WLHRLREAGVKLHMRHRWAGWSAAPSGQADQPEALRFETPDGERLVHADAVVLAMGGGSW
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEECEEEEEECCCCC
PRLGSDGAWVPRLEARGVQVLPLKPANCGFDADWSAHFRERFAGQPVKSVAIGVASGDDG
CCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHEEEEEECCCCC
ARQFRPGEFLVTQSGIEGSLVYALSAPIRDALEAGGEITIWLDLAPGWSAQRVADALMRP
HHHCCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCC
RGARSMSSHLQSKLNITGVKLGLLRECLSKDAFADLAQLAQAIKALPLRLTRARPIDEAI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SSAGGVAFEALDANLMIARLPGVFCAGEMLDWEAPTGGYLLTACFASGAAAGHGVLAYLA
HHCCCEEEEECCCCEEEEECCCCEECCCEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
TAARG
HHCCC
>Mature Secondary Structure 
SEPHNAPLVAVIGAGPAGLMAAEVLSRAGVRVEVFDSMPSAGRKFLLAGIGGMNITHSE
CCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCHHH
AFDAFLGRYRARREQLAPLIDRFSPDALRDWVHGLGIETFIGSSGRVFPTDMKAAPLLRA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEECCCCCCCCCCCCHHHHHHH
WLHRLREAGVKLHMRHRWAGWSAAPSGQADQPEALRFETPDGERLVHADAVVLAMGGGSW
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEECEEEEEECCCCC
PRLGSDGAWVPRLEARGVQVLPLKPANCGFDADWSAHFRERFAGQPVKSVAIGVASGDDG
CCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHEEEEEECCCCC
ARQFRPGEFLVTQSGIEGSLVYALSAPIRDALEAGGEITIWLDLAPGWSAQRVADALMRP
HHHCCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCC
RGARSMSSHLQSKLNITGVKLGLLRECLSKDAFADLAQLAQAIKALPLRLTRARPIDEAI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SSAGGVAFEALDANLMIARLPGVFCAGEMLDWEAPTGGYLLTACFASGAAAGHGVLAYLA
HHCCCEEEEECCCCEEEEECCCCEECCCEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
TAARG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]