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The map label for this gene is rsmE [H]

Identifier: 17547482

GI number: 17547482

Start: 2974718

End: 2975467

Strand: Direct

Name: rsmE [H]

Synonym: RSc2763

Alternate gene names: 17547482

Gene position: 2974718-2975467 (Clockwise)

Preceding gene: 17547481

Following gene: 17547483

Centisome position: 80.04

GC content: 70.13

Gene sequence:

>750_bases
ATGGGGCTTCCCCGTTTTCATATCGATTCACCGCTTGCCCCCCACACCACTGTCACGCTGCCGGAAAGCGTCGCGCGCCA
TATCCATGTGCTGCGCCTGGCTGTCGGCGACGATGTCTGCCTGTTCGACGGCTCGGGCCAGGAGTTTCGCGCCCGGCTCG
ATGCCATCAACCGCCGCGATGCGACCGCCAGCCTGGCCGATGCCACGCAACCCGACACCGAAGCGCGCTATGCCATCACG
CTCGCCCAGGGCATCGCCGGCGGCGACAAGATGGACTGGCTGATCGAGAAGGCGGTCGAACTGGGAGTGCACGCCATCGC
CCCGCTGCAGACCGAGCGCGGCGTCGTGCGGCTGTCGGGCGAGCGCGCCGTCAAGCGCGTCCAGCATTGGCAGGCACTGG
TGCAGGCCGCGTGCGAACAGTGCGGCCGGGCGCGCGTGCCCGCCGTGTCCCCCGTCGCGCCCCTGCGCGACTGGCTGGCG
GCGGCCAAGGCATCGGCGCGCGCGCGCGTGATGCTGTCGCCGCGCGGCAGCGAGCCGCTCACGCAATGGGCCGTGCAATC
GCGCGAGCGCATCGGCAGTGCCGGCATCGAACTGCTGATCGGCCCGGAAGGCGGACTGTCGCCCGACGAGGAAGCGCTGG
CGGAAGCGGCCGGCTACTTACCGCTGACACTTGGCCGACGTATCCTGAGGACGGAATCCGCAGCGCTGGTCGCCGTCTCC
GCGCTGCATGCCGTCCTCGGCGAATTCTGA

Upstream 100 bases:

>100_bases
GCGAACGCTACGCCGCCGTGCGCGACCCCGACGGCTATCGCTGGGGCCTCGCCTGTCACCCGGCCGGCGCACCCGCCTGA
TTCACCACAAGGATGGTCCG

Downstream 100 bases:

>100_bases
CCGCTTGATCCCAACCGGCGGGTCCCCTCTCCCCGCCTCTGACGAAAGGAGCTTCATCATGGGTCTACTCGAATCGGTGC
TCGGCCTGGGCGGCAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MGLPRFHIDSPLAPHTTVTLPESVARHIHVLRLAVGDDVCLFDGSGQEFRARLDAINRRDATASLADATQPDTEARYAIT
LAQGIAGGDKMDWLIEKAVELGVHAIAPLQTERGVVRLSGERAVKRVQHWQALVQAACEQCGRARVPAVSPVAPLRDWLA
AAKASARARVMLSPRGSEPLTQWAVQSRERIGSAGIELLIGPEGGLSPDEEALAEAAGYLPLTLGRRILRTESAALVAVS
ALHAVLGEF

Sequences:

>Translated_249_residues
MGLPRFHIDSPLAPHTTVTLPESVARHIHVLRLAVGDDVCLFDGSGQEFRARLDAINRRDATASLADATQPDTEARYAIT
LAQGIAGGDKMDWLIEKAVELGVHAIAPLQTERGVVRLSGERAVKRVQHWQALVQAACEQCGRARVPAVSPVAPLRDWLA
AAKASARARVMLSPRGSEPLTQWAVQSRERIGSAGIELLIGPEGGLSPDEEALAEAAGYLPLTLGRRILRTESAALVAVS
ALHAVLGEF
>Mature_248_residues
GLPRFHIDSPLAPHTTVTLPESVARHIHVLRLAVGDDVCLFDGSGQEFRARLDAINRRDATASLADATQPDTEARYAITL
AQGIAGGDKMDWLIEKAVELGVHAIAPLQTERGVVRLSGERAVKRVQHWQALVQAACEQCGRARVPAVSPVAPLRDWLAA
AKASARARVMLSPRGSEPLTQWAVQSRERIGSAGIELLIGPEGGLSPDEEALAEAAGYLPLTLGRRILRTESAALVAVSA
LHAVLGEF

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=250, Percent_Identity=38.8, Blast_Score=168, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 26602; Mature: 26471

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPRFHIDSPLAPHTTVTLPESVARHIHVLRLAVGDDVCLFDGSGQEFRARLDAINRRD
CCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHCCC
ATASLADATQPDTEARYAITLAQGIAGGDKMDWLIEKAVELGVHAIAPLQTERGVVRLSG
CHHHHHCCCCCCCCHHEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECH
ERAVKRVQHWQALVQAACEQCGRARVPAVSPVAPLRDWLAAAKASARARVMLSPRGSEPL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHH
TQWAVQSRERIGSAGIELLIGPEGGLSPDEEALAEAAGYLPLTLGRRILRTESAALVAVS
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALHAVLGEF
HHHHHHCCC
>Mature Secondary Structure 
GLPRFHIDSPLAPHTTVTLPESVARHIHVLRLAVGDDVCLFDGSGQEFRARLDAINRRD
CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHCCC
ATASLADATQPDTEARYAITLAQGIAGGDKMDWLIEKAVELGVHAIAPLQTERGVVRLSG
CHHHHHCCCCCCCCHHEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECH
ERAVKRVQHWQALVQAACEQCGRARVPAVSPVAPLRDWLAAAKASARARVMLSPRGSEPL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHH
TQWAVQSRERIGSAGIELLIGPEGGLSPDEEALAEAAGYLPLTLGRRILRTESAALVAVS
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALHAVLGEF
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]