Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is 17547390
Identifier: 17547390
GI number: 17547390
Start: 2880917
End: 2881312
Strand: Direct
Name: 17547390
Synonym: RSc2671
Alternate gene names: NA
Gene position: 2880917-2881312 (Clockwise)
Preceding gene: 17547389
Following gene: 17547391
Centisome position: 77.52
GC content: 66.16
Gene sequence:
>396_bases ATGGCAAGCGTCATCAACTGGTTTGAAATCCCGACGGCCGACTTCCCGCGCGCGGTGAAGTTCTACGAGCACGTCTTCGA CACCCGGCTCAGGCAGGAAGACATGGGCGACATGCGGATGGGCGTGTTCCCGGCCGGCGAGACCACCGTCCACGGCGCGC TGGTCCACGGCCAGGGCTTCGCGCCCTCCGACAAGGGCAGCGTGCTGTACCTGAACGCGCCGGACCTGGACACCGTGCTC GAGCGCGTCAACGGCAACGGCGGCCAGTGCGTGTTCGGCCCGATGACACTGCCCGACCACATGGGCCGCATCGCCCACAT CGTCGATACCGAAGGCAACCGCATCGGCCTGCACGAGCCCGATGCGACGACGCAGGCTTACCTGTTGCAGCAATAG
Upstream 100 bases:
>100_bases CAGGCTCCTGACAGAACGCTGTCAGGAGCCCCCCGCCACAATCGCTCCACCTCAACGAGGCAGGTCTCCCGACGGCCTGC CTCCCAATCGGAGCGCCCCC
Downstream 100 bases:
>100_bases CGCCCCGGCCGGCGCAACCGCCGGCCCCACCCCAGACCGAGAAGCACACCATGCCGAGCCAATCGCCCTATCTGATGCGC GCCGCCGACATCGCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase; Lactoylglutathione Lyase-Related Protein; Glyoxalase Family Protein; Glyoxalase Related Lactoylglutathione Lyase; Lipoprotein
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MASVINWFEIPTADFPRAVKFYEHVFDTRLRQEDMGDMRMGVFPAGETTVHGALVHGQGFAPSDKGSVLYLNAPDLDTVL ERVNGNGGQCVFGPMTLPDHMGRIAHIVDTEGNRIGLHEPDATTQAYLLQQ
Sequences:
>Translated_131_residues MASVINWFEIPTADFPRAVKFYEHVFDTRLRQEDMGDMRMGVFPAGETTVHGALVHGQGFAPSDKGSVLYLNAPDLDTVL ERVNGNGGQCVFGPMTLPDHMGRIAHIVDTEGNRIGLHEPDATTQAYLLQQ >Mature_130_residues ASVINWFEIPTADFPRAVKFYEHVFDTRLRQEDMGDMRMGVFPAGETTVHGALVHGQGFAPSDKGSVLYLNAPDLDTVLE RVNGNGGQCVFGPMTLPDHMGRIAHIVDTEGNRIGLHEPDATTQAYLLQQ
Specific function: Unknown
COG id: COG3324
COG function: function code R; Predicted enzyme related to lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14426; Mature: 14295
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVINWFEIPTADFPRAVKFYEHVFDTRLRQEDMGDMRMGVFPAGETTVHGALVHGQGF CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCC APSDKGSVLYLNAPDLDTVLERVNGNGGQCVFGPMTLPDHMGRIAHIVDTEGNRIGLHEP CCCCCCCEEEEECCCHHHHHHHHCCCCCEEEECCCCCHHHCCCEEEEEECCCCEECCCCC DATTQAYLLQQ CCCCCEEEECC >Mature Secondary Structure ASVINWFEIPTADFPRAVKFYEHVFDTRLRQEDMGDMRMGVFPAGETTVHGALVHGQGF CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCC APSDKGSVLYLNAPDLDTVLERVNGNGGQCVFGPMTLPDHMGRIAHIVDTEGNRIGLHEP CCCCCCCEEEEECCCHHHHHHHHCCCCCEEEECCCCCHHHCCCEEEEEECCCCEECCCCC DATTQAYLLQQ CCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA