| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546445
Identifier: 17546445
GI number: 17546445
Start: 1847293
End: 1847919
Strand: Direct
Name: 17546445
Synonym: RSc1726
Alternate gene names: NA
Gene position: 1847293-1847919 (Clockwise)
Preceding gene: 17546444
Following gene: 17546446
Centisome position: 49.71
GC content: 66.19
Gene sequence:
>627_bases ATGTCCGCAGATAACGCGGTAGGCCTGTTCCCCGTGAGCTATGTGGTCGGCACCGGCTTGCCCGGCGCACCGACGCTCAG GCTCAACCTGCTGGTTGATACGCCGAGGCGCAAGGTGGTCGGCAATGCGACGGTTACCCAGGCGGTGTCGCCACCGCTCG ACCTGCATGTCGATGTCTGGGGCGAATTCACGTACATGGCCCTGATGCCGCCGCACGGCACCCGCATCCTGGTGACGGTG CAGGGCAATAGCGGCGGGCCGACCTCGAATGCCATGACGACCTTCCGGCTGCACATGGTGGTGGGCGCCGATTGGCAGGC CGGCATCGCCAGCTACAGCTATTGGAGCAACGGTCAGTGGCACGAGGTGGAAAGCGTGCCGGCGCGCGTCGACCACGAAT TCGTGCCGCTGGAGCCGGGGCCGGTGATTCCCGAGACGCTGAATGCGCTGACGATCGGCCGCACGCTGTACGGCCCGGCG ATTCAGCGCGCCAGGGCATCCGGCGACCTGGCCCACATGAAGACGCTCGCCGCGTATGTGCAGCAGCAGTTGGACAGCCA CCAGGAAATTGTCAGCGCCCATGCGGCGCTGCACGCCGAAATCCGCAAGCTCGAAGGCCGGCAGTGA
Upstream 100 bases:
>100_bases CAGGCTCGAAATCGCCAAGGCCGAGCGCGGCTGATCCGGCTGGCGCCGCACGCCAGCATTCCACATTCCATTCTGATCCA TCCCTCAACAAGGAGGACGT
Downstream 100 bases:
>100_bases TTCCAGCGGCCACCCGCAAGCAGTGTTCACCTTTCTTCCAGGAGTGATTCCATGAGCCAAACCGGTCTGTTTCCCGTCAC CTACGTTGTCGCTACGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSADNAVGLFPVSYVVGTGLPGAPTLRLNLLVDTPRRKVVGNATVTQAVSPPLDLHVDVWGEFTYMALMPPHGTRILVTV QGNSGGPTSNAMTTFRLHMVVGADWQAGIASYSYWSNGQWHEVESVPARVDHEFVPLEPGPVIPETLNALTIGRTLYGPA IQRARASGDLAHMKTLAAYVQQQLDSHQEIVSAHAALHAEIRKLEGRQ
Sequences:
>Translated_208_residues MSADNAVGLFPVSYVVGTGLPGAPTLRLNLLVDTPRRKVVGNATVTQAVSPPLDLHVDVWGEFTYMALMPPHGTRILVTV QGNSGGPTSNAMTTFRLHMVVGADWQAGIASYSYWSNGQWHEVESVPARVDHEFVPLEPGPVIPETLNALTIGRTLYGPA IQRARASGDLAHMKTLAAYVQQQLDSHQEIVSAHAALHAEIRKLEGRQ >Mature_207_residues SADNAVGLFPVSYVVGTGLPGAPTLRLNLLVDTPRRKVVGNATVTQAVSPPLDLHVDVWGEFTYMALMPPHGTRILVTVQ GNSGGPTSNAMTTFRLHMVVGADWQAGIASYSYWSNGQWHEVESVPARVDHEFVPLEPGPVIPETLNALTIGRTLYGPAI QRARASGDLAHMKTLAAYVQQQLDSHQEIVSAHAALHAEIRKLEGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22463; Mature: 22332
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADNAVGLFPVSYVVGTGLPGAPTLRLNLLVDTPRRKVVGNATVTQAVSPPLDLHVDVW CCCCCCEEEEEHHHHHHCCCCCCCEEEEEEEEECCCCEEECCCCEEHHCCCCCEEEEEEC GEFTYMALMPPHGTRILVTVQGNSGGPTSNAMTTFRLHMVVGADWQAGIASYSYWSNGQW CCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHCCCCCCCCCCCCE HEVESVPARVDHEFVPLEPGPVIPETLNALTIGRTLYGPAIQRARASGDLAHMKTLAAYV EECCCCCCCCCCCEECCCCCCCCHHHHHHEECCHHHHHHHHHHHHCCCCHHHHHHHHHHH QQQLDSHQEIVSAHAALHAEIRKLEGRQ HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SADNAVGLFPVSYVVGTGLPGAPTLRLNLLVDTPRRKVVGNATVTQAVSPPLDLHVDVW CCCCCEEEEEHHHHHHCCCCCCCEEEEEEEEECCCCEEECCCCEEHHCCCCCEEEEEEC GEFTYMALMPPHGTRILVTVQGNSGGPTSNAMTTFRLHMVVGADWQAGIASYSYWSNGQW CCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHCCCCCCCCCCCCE HEVESVPARVDHEFVPLEPGPVIPETLNALTIGRTLYGPAIQRARASGDLAHMKTLAAYV EECCCCCCCCCCCEECCCCCCCCHHHHHHEECCHHHHHHHHHHHHCCCCHHHHHHHHHHH QQQLDSHQEIVSAHAALHAEIRKLEGRQ HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA