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The map label for this gene is 17546440

Identifier: 17546440

GI number: 17546440

Start: 1841340

End: 1841906

Strand: Direct

Name: 17546440

Synonym: RSc1721

Alternate gene names: NA

Gene position: 1841340-1841906 (Clockwise)

Preceding gene: 17546437

Following gene: 17546441

Centisome position: 49.55

GC content: 65.61

Gene sequence:

>567_bases
ATGTCCAAGTCGTCGTCCTCTTCGAAAGTCGATTTGCCGGAAGCTGCCGCCAATGAAGGCGGAAAAAGCGGGGCGATCGT
GTCATCGGCCCACCTGGTTTCGGCGCGCAGCCCGGAACTGTCGGAGTTCGAGTTCGCGCTCAATACGGCCTACAACGCTT
ATCACCGCTGGTGCGTGCGCTGCATGGCGGCGGCCGGCGTGCGCGACCTGACCTTCCTCGATGTGCTGGTGGTGCATCAC
GTGAACCACCGGGGCCGCGCCAAGCGGCTGGCCGACATCTGCTTCGTGCTGAACGTGGAGGACACCCACCTCGTCACCTA
TTCGCTCAAGAAGCTGCAGGCGCTGGAGCTGGTGGAGGGCACCCGCAACGGCAAGGAAGTCACCTACACCACCACGGCGA
CCGGCGAGACGGCCTGCGCGCGCTATCGGGAGATCCGCGAGCAGTGCCTGACCAGCAACATCTCGCCGGGCGGCGAGGAA
AACGCCGAGATCGGCGAGCTGGCGCGGCTGATGCGCGTGCTGACGGGGCTGTACGAGCAGGCGGCGCGTTCGGCCACCTC
GCTGTAA

Upstream 100 bases:

>100_bases
CGCGCCAGGTAGGGTGAGCGGACATAATGGGGGGCGGAGATGGCGATCGATTCTCTTACAATAGTTGGCGTTGCCATCCT
TTTCTGCCCGCGAGTCACGC

Downstream 100 bases:

>100_bases
AACGCCCGTTCGGGCCGGCGGCGGCACATTTTGGGCCGATCGGGGCGTCGGTGCGGCGGGCTGGGCAAGGTACAATAGCG
GTTTTCCCGCGCACGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSKSSSSSKVDLPEAAANEGGKSGAIVSSAHLVSARSPELSEFEFALNTAYNAYHRWCVRCMAAAGVRDLTFLDVLVVHH
VNHRGRAKRLADICFVLNVEDTHLVTYSLKKLQALELVEGTRNGKEVTYTTTATGETACARYREIREQCLTSNISPGGEE
NAEIGELARLMRVLTGLYEQAARSATSL

Sequences:

>Translated_188_residues
MSKSSSSSKVDLPEAAANEGGKSGAIVSSAHLVSARSPELSEFEFALNTAYNAYHRWCVRCMAAAGVRDLTFLDVLVVHH
VNHRGRAKRLADICFVLNVEDTHLVTYSLKKLQALELVEGTRNGKEVTYTTTATGETACARYREIREQCLTSNISPGGEE
NAEIGELARLMRVLTGLYEQAARSATSL
>Mature_187_residues
SKSSSSSKVDLPEAAANEGGKSGAIVSSAHLVSARSPELSEFEFALNTAYNAYHRWCVRCMAAAGVRDLTFLDVLVVHHV
NHRGRAKRLADICFVLNVEDTHLVTYSLKKLQALELVEGTRNGKEVTYTTTATGETACARYREIREQCLTSNISPGGEEN
AEIGELARLMRVLTGLYEQAARSATSL

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20478; Mature: 20347

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSSSSSKVDLPEAAANEGGKSGAIVSSAHLVSARSPELSEFEFALNTAYNAYHRWCVR
CCCCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
CMAAAGVRDLTFLDVLVVHHVNHRGRAKRLADICFVLNVEDTHLVTYSLKKLQALELVEG
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHC
TRNGKEVTYTTTATGETACARYREIREQCLTSNISPGGEENAEIGELARLMRVLTGLYEQ
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AARSATSL
HHHHHCCC
>Mature Secondary Structure 
SKSSSSSKVDLPEAAANEGGKSGAIVSSAHLVSARSPELSEFEFALNTAYNAYHRWCVR
CCCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
CMAAAGVRDLTFLDVLVVHHVNHRGRAKRLADICFVLNVEDTHLVTYSLKKLQALELVEG
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHC
TRNGKEVTYTTTATGETACARYREIREQCLTSNISPGGEENAEIGELARLMRVLTGLYEQ
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AARSATSL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA