Click here to switch to the map view.

The map label for this gene is 17546427

Identifier: 17546427

GI number: 17546427

Start: 1824372

End: 1824566

Strand: Direct

Name: 17546427

Synonym: RSc1708

Alternate gene names: NA

Gene position: 1824372-1824566 (Clockwise)

Preceding gene: 17546422

Following gene: 17546428

Centisome position: 49.09

GC content: 68.21

Gene sequence:

>195_bases
ATGACGATCTTCGACGAGAACGAGCATCGCGAGCAGTTCTGGGCTGCCGTGCGTGACGCGATCGCCTTGCGCGAGCAGTC
CGCGCGGGCTCACCGCACCGAGCGGCTGGTCGGCGCGGCGATCGGATTGTCGATTGCCGCGCTCGGGCTGGCCTTGCTGG
TATGGCGTCGCCACACCCGTGGCGATGCCGACTAG

Upstream 100 bases:

>100_bases
CCAAAGGCGGCCGCCTTACGCCATAGCGCGGATAGGCGCCGGGCGTACGCATTCCCTACGATGAAGCCGTCGACACAACG
GTACGAGCGGGGCGCGCGCC

Downstream 100 bases:

>100_bases
CCGTTGCGGCGGATCAAGCCGAGGCCTCGGGGGAGGGCGATACAATCCGGCGCTTCCCGGACGGATTGCCCATGCCTCGC
GGCCTCATTCTCGCCACACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MTIFDENEHREQFWAAVRDAIALREQSARAHRTERLVGAAIGLSIAALGLALLVWRRHTRGDAD

Sequences:

>Translated_64_residues
MTIFDENEHREQFWAAVRDAIALREQSARAHRTERLVGAAIGLSIAALGLALLVWRRHTRGDAD
>Mature_63_residues
TIFDENEHREQFWAAVRDAIALREQSARAHRTERLVGAAIGLSIAALGLALLVWRRHTRGDAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7210; Mature: 7079

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFDENEHREQFWAAVRDAIALREQSARAHRTERLVGAAIGLSIAALGLALLVWRRHTR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDAD
CCCC
>Mature Secondary Structure 
TIFDENEHREQFWAAVRDAIALREQSARAHRTERLVGAAIGLSIAALGLALLVWRRHTR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDAD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA