| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546410
Identifier: 17546410
GI number: 17546410
Start: 1809829
End: 1810167
Strand: Direct
Name: 17546410
Synonym: RSc1691
Alternate gene names: NA
Gene position: 1809829-1810167 (Clockwise)
Preceding gene: 17546409
Following gene: 17546411
Centisome position: 48.7
GC content: 64.9
Gene sequence:
>339_bases GTGGCAATCGAAACGTTCACCTGGCGGGCGGTCGGCTCGGCGCAGGGCAGCGTCAAGTTCAGCACGCTCAGCGCGCAGTT CGGAGACGGCTACCAGCAGGTGGCGCCGGCGGGCATCAATAACCGCTCCTCGAGCTGGCCGCTCCGGTTTGCGGGCGGCA AGGCTCGGATTCTCGAAATTCAGGCGTTCATCGACCGGCACGCCGGTGCCAAGCGGTTCTATTGGACCCCGCCGCTCGGC GCGCGTGGGCTTTTTCGTATTGGCGAGTACACCCCGGCTGCCGAGACCGGTGGCGTGTATTCGCTGTCAGCAACCTTTGT TGAGGCCTTTGCGCCATGA
Upstream 100 bases:
>100_bases AGATCGACCTGATTTTCAAGGAAATGGATCGCCGCATCGATGACCGCATCCAGCGCGCCACCATGCAGGGCGGCGTGCTG TCGCGGCGAGGGGGGTAATC
Downstream 100 bases:
>100_bases CTTTGCAGCTCCAGAAAATCAACCTCGGTACCCCACCGCTAGGCAGGGATGGGAACACCAACCGCGAGTGCAACGCGAAG ACCAACGACAACATGGCCGC
Product: phage HK97 GP17-like protein
Products: NA
Alternate protein names: Minor Tail Family Protein; Prophage LambdaSo Minor Tail Protein M; Prophage LambdaSo Protein; Phage Minor Tail; Phage Minor Tail Family Protein; Phage-Related Protein
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAIETFTWRAVGSAQGSVKFSTLSAQFGDGYQQVAPAGINNRSSSWPLRFAGGKARILEIQAFIDRHAGAKRFYWTPPLG ARGLFRIGEYTPAAETGGVYSLSATFVEAFAP
Sequences:
>Translated_112_residues MAIETFTWRAVGSAQGSVKFSTLSAQFGDGYQQVAPAGINNRSSSWPLRFAGGKARILEIQAFIDRHAGAKRFYWTPPLG ARGLFRIGEYTPAAETGGVYSLSATFVEAFAP >Mature_111_residues AIETFTWRAVGSAQGSVKFSTLSAQFGDGYQQVAPAGINNRSSSWPLRFAGGKARILEIQAFIDRHAGAKRFYWTPPLGA RGLFRIGEYTPAAETGGVYSLSATFVEAFAP
Specific function: Unknown
COG id: COG4718
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12079; Mature: 11948
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIETFTWRAVGSAQGSVKFSTLSAQFGDGYQQVAPAGINNRSSSWPLRFAGGKARILEI CCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCEEECCCCEEEEEH QAFIDRHAGAKRFYWTPPLGARGLFRIGEYTPAAETGGVYSLSATFVEAFAP EEHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCEEEEHHHHHHHCCC >Mature Secondary Structure AIETFTWRAVGSAQGSVKFSTLSAQFGDGYQQVAPAGINNRSSSWPLRFAGGKARILEI CCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCEEECCCCEEEEEH QAFIDRHAGAKRFYWTPPLGARGLFRIGEYTPAAETGGVYSLSATFVEAFAP EEHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA