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The map label for this gene is 17546399

Identifier: 17546399

GI number: 17546399

Start: 1797957

End: 1798331

Strand: Direct

Name: 17546399

Synonym: RSc1680

Alternate gene names: NA

Gene position: 1797957-1798331 (Clockwise)

Preceding gene: 17546398

Following gene: 17546400

Centisome position: 48.38

GC content: 68.8

Gene sequence:

>375_bases
ATGCCACCCAAGGCACCGCGCCCGTGCCGTGTGCCGGGCTGTCCCAAGTACGCCGCACCCGGCGGCGCCTACTGCGAGGA
ACACGCGGTCCAACGGCACGAGACAGAGGTTGCCCGCCGTGGCACAGCTGCGAGTCGCGGCTACGGATCGAAGTGGCAGC
GCGAGCGGCTCGAGTACCTGAAGCGCAACCCGATCTGCGTGGAGTGCAAGAGGGGTGGCCACGTGGTGCCGGCCAAGGTT
GTCGACCACATCGTGCCGCACAAGGGCGATCAGCATCTGTTCTGGCGCCGCAGCAACTGGCAGGCGCTGTGCAAGACGTG
CCACGACCGCAAGACGGCGCGCGAGGACGGCGGGTTCGCCAACCCGAGGCGCTGA

Upstream 100 bases:

>100_bases
CGTCGATAGGGAACGTGCGTCCGCAGAATCCATCACCGAAGCCCCGAGTGCGCAAGCCCTCGGGGCTTTGTCTTTTCCGC
TTCCTGTTCGGAGTTTGAGC

Downstream 100 bases:

>100_bases
ATGCGGCACGGCAGCGCGGGTGGGGTGGCCGGGGGTGCCACCCCACCGGGGAGGGGGGGCGTGAGGGGGCACCCCCCCGG
GGGGAGGGGGGGTGGTCCGA

Product: phage phi-105 holin-like protein

Products: NA

Alternate protein names: HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; Phage Associated Protein; Prophage LambdaSo Holin; HNH Endonuclease Domain Protein; HNH Endonuclease Family Protein; HNH Nuclease Family Protein; Phage Holin Protein; Phage HNH Endonuclease; Holin Protein; Prophage; Phage-Like Protein; Gp82 Phage Protein; Phage Protein; Phage Endonuclease; Phage Holin; HNH Nuclease; Endonuclease

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MPPKAPRPCRVPGCPKYAAPGGAYCEEHAVQRHETEVARRGTAASRGYGSKWQRERLEYLKRNPICVECKRGGHVVPAKV
VDHIVPHKGDQHLFWRRSNWQALCKTCHDRKTAREDGGFANPRR

Sequences:

>Translated_124_residues
MPPKAPRPCRVPGCPKYAAPGGAYCEEHAVQRHETEVARRGTAASRGYGSKWQRERLEYLKRNPICVECKRGGHVVPAKV
VDHIVPHKGDQHLFWRRSNWQALCKTCHDRKTAREDGGFANPRR
>Mature_123_residues
PPKAPRPCRVPGCPKYAAPGGAYCEEHAVQRHETEVARRGTAASRGYGSKWQRERLEYLKRNPICVECKRGGHVVPAKVV
DHIVPHKGDQHLFWRRSNWQALCKTCHDRKTAREDGGFANPRR

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14123; Mature: 13992

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPKAPRPCRVPGCPKYAAPGGAYCEEHAVQRHETEVARRGTAASRGYGSKWQRERLEYL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KRNPICVECKRGGHVVPAKVVDHIVPHKGDQHLFWRRSNWQALCKTCHDRKTAREDGGFA
HCCCEEEEECCCCEECHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
NPRR
CCCC
>Mature Secondary Structure 
PPKAPRPCRVPGCPKYAAPGGAYCEEHAVQRHETEVARRGTAASRGYGSKWQRERLEYL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KRNPICVECKRGGHVVPAKVVDHIVPHKGDQHLFWRRSNWQALCKTCHDRKTAREDGGFA
HCCCEEEEECCCCEECHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
NPRR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA