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The map label for this gene is pbpG [H]

Identifier: 17546328

GI number: 17546328

Start: 1729902

End: 1731029

Strand: Direct

Name: pbpG [H]

Synonym: RSc1609

Alternate gene names: 17546328

Gene position: 1729902-1731029 (Clockwise)

Preceding gene: 17546327

Following gene: 17546330

Centisome position: 46.55

GC content: 66.84

Gene sequence:

>1128_bases
ATGACCGTCGCGTTCACCGCCGCCTCCGTTGCCTCGTCCCATGCCGTTGCGGCCGACAAGGCTTCCGCTTCCGCCAAGAA
ATCCGGCAAGTCCAAGAGCAAGATCCGCAAAGCCTCGACGCAGGCCGCCGCCGATGATGGTGCCGGCGCCAAGATCCGCA
AGGTCGTGACCGTGAGGGGCAAGCGCCATGTGATTCTGGTTGAGCGCGGTGCCCGCCCGATGCGCGCCGCGTACGTGCCG
GCCGCGCCGACGCTCGGCGAGGCGATGGGCCTGCGCGCCACGCCGGATGCGCTGGCGCTGCGCTCGTCGGTGGCGCTGGT
GATGGACCAGGGTTCCGGCGACGTCCTGTTCCAGAAGAATGCCTCGGCCGTGCTGCCGATCGCTTCGATCACCAAGCTGA
TGACCGCGCTGGTCGTGACGGATGCCCACCAGCCGATGGACGAGCTGCTGGAGATCACCGAAGACGACCGCGACTTCGAG
CGCAATACCGGCTCGCGCCTGCGCTATGGCACGATGCTCACGCGCGAAGACCTGCTGCTGCTGGCACTGATGTCGTCGGA
AAACCGTGCCGCCTCGGCGCTGGGCCGTAGCTATCCGGGCGGTCGCCCCGCTTTCGTTGCCGCGATGAACCGCAAGGCGC
ACGAACTGGGCATGACCGACACGCACTATGTCGATTCGAACGGCCTGTCGAGCAGCAATGTCTCCAGCGCGATGGACCTG
GCCAAGATCGTCATGGCTGCCTACAAGGTGCCCCTGATCCGCCAGTTCACCACCACCGCCGAGCACACCGTCAACGCCAA
CGGCCGCACGCTGCACTACGTCAACACCAACCGCCTCGTGCGCGGCGGCGAGTGGGACATCGGCCTGCAGAAGACCGGCT
TCATCAACGAAGCCGGCCGCTGCCTGGTGATGCAGGCCAATGTGCACGGCCGCAATGTGGTGATGGTGTTCCTGGATTCC
GCGGGCAACCTGACACGTTTTGCCGATGCCGTGCGCGTGCGCAACTGGCTCGAGCGCGCCCCGCATGGCGAGGCACAAGC
GGCAACGCAGGCTGCTGCGCCGCTGCGCAACGTACCGGTGTCGCAGCCGGCGACGGTGCTGGCTTCCGAGCAGACGCACG
GTACCTGA

Upstream 100 bases:

>100_bases
TTTTGTTTTTGCCTACACTTGCGCCATCTCACGCGCGGGTGATCGAATCATGTCACGGTCTGTTTCCTCATTTTTCAGGC
GCATCGGCCTCGTTTCGCTG

Downstream 100 bases:

>100_bases
GCGTTGCGCCTGTTTCGGCCCCAACAAAAAAGCGCGTCATGGACGCGCTTTTTTGTTGGGCGACGCGCGCGTCGGATCAT
TCCGCGCGCAGCACCGGCTG

Product: D-alanyl-D-alanine-endopeptidase (penicillin-binding protein)

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTVAFTAASVASSHAVAADKASASAKKSGKSKSKIRKASTQAAADDGAGAKIRKVVTVRGKRHVILVERGARPMRAAYVP
AAPTLGEAMGLRATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDAHQPMDELLEITEDDRDFE
RNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAAMNRKAHELGMTDTHYVDSNGLSSSNVSSAMDL
AKIVMAAYKVPLIRQFTTTAEHTVNANGRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDS
AGNLTRFADAVRVRNWLERAPHGEAQAATQAAAPLRNVPVSQPATVLASEQTHGT

Sequences:

>Translated_375_residues
MTVAFTAASVASSHAVAADKASASAKKSGKSKSKIRKASTQAAADDGAGAKIRKVVTVRGKRHVILVERGARPMRAAYVP
AAPTLGEAMGLRATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDAHQPMDELLEITEDDRDFE
RNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAAMNRKAHELGMTDTHYVDSNGLSSSNVSSAMDL
AKIVMAAYKVPLIRQFTTTAEHTVNANGRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDS
AGNLTRFADAVRVRNWLERAPHGEAQAATQAAAPLRNVPVSQPATVLASEQTHGT
>Mature_374_residues
TVAFTAASVASSHAVAADKASASAKKSGKSKSKIRKASTQAAADDGAGAKIRKVVTVRGKRHVILVERGARPMRAAYVPA
APTLGEAMGLRATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDAHQPMDELLEITEDDRDFER
NTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAAMNRKAHELGMTDTHYVDSNGLSSSNVSSAMDLA
KIVMAAYKVPLIRQFTTTAEHTVNANGRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSA
GNLTRFADAVRVRNWLERAPHGEAQAATQAAAPLRNVPVSQPATVLASEQTHGT

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=262, Percent_Identity=44.2748091603053, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1787062, Length=266, Percent_Identity=27.0676691729323, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 39927; Mature: 39796

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAFTAASVASSHAVAADKASASAKKSGKSKSKIRKASTQAAADDGAGAKIRKVVTVRG
CEEEEEHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
KRHVILVERGARPMRAAYVPAAPTLGEAMGLRATPDALALRSSVALVMDQGSGDVLFQKN
CEEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCCHHHHHHCCEEEEEECCCCCEEEECC
ASAVLPIASITKLMTALVVTDAHQPMDELLEITEDDRDFERNTGSRLRYGTMLTREDLLL
CCEEECHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCCEEEECCCCCHHCEEE
LALMSSENRAASALGRSYPGGRPAFVAAMNRKAHELGMTDTHYVDSNGLSSSNVSSAMDL
EEEECCCCHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCEEECCCCCCCCCHHHHHHH
AKIVMAAYKVPLIRQFTTTAEHTVNANGRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGR
HHHHHHHHHCHHHHHHHCCHHHEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCC
CLVMQANVHGRNVVMVFLDSAGNLTRFADAVRVRNWLERAPHGEAQAATQAAAPLRNVPV
EEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCC
SQPATVLASEQTHGT
CCCCEEEECCCCCCC
>Mature Secondary Structure 
TVAFTAASVASSHAVAADKASASAKKSGKSKSKIRKASTQAAADDGAGAKIRKVVTVRG
EEEEEHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
KRHVILVERGARPMRAAYVPAAPTLGEAMGLRATPDALALRSSVALVMDQGSGDVLFQKN
CEEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCCHHHHHHCCEEEEEECCCCCEEEECC
ASAVLPIASITKLMTALVVTDAHQPMDELLEITEDDRDFERNTGSRLRYGTMLTREDLLL
CCEEECHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCCEEEECCCCCHHCEEE
LALMSSENRAASALGRSYPGGRPAFVAAMNRKAHELGMTDTHYVDSNGLSSSNVSSAMDL
EEEECCCCHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCEEECCCCCCCCCHHHHHHH
AKIVMAAYKVPLIRQFTTTAEHTVNANGRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGR
HHHHHHHHHCHHHHHHHCCHHHEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCC
CLVMQANVHGRNVVMVFLDSAGNLTRFADAVRVRNWLERAPHGEAQAATQAAAPLRNVPV
EEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCC
SQPATVLASEQTHGT
CCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]