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The map label for this gene is iscR [H]

Identifier: 17545737

GI number: 17545737

Start: 1072321

End: 1072902

Strand: Direct

Name: iscR [H]

Synonym: RSc1018

Alternate gene names: 17545737

Gene position: 1072321-1072902 (Clockwise)

Preceding gene: 17545731

Following gene: 17545738

Centisome position: 28.85

GC content: 68.9

Gene sequence:

>582_bases
ATGAGATTGACCACCAAAGGCCGCTTCGCGGTCACCGCCATGATTGACTTGGCGCTGCGCCAGGAGCAGGGTCCGGTCAC
GCTGGCCGGGATCAGCCAGCGCCAGAAGATTTCGCTGTCGTATCTGGAGCAACTGTTCGGCAAGCTGCGCCGCCACGAGA
TCGTGGAGAGCGTGCGCGGTCCGGGCGGCGGCTATAGCCTGGCGCGCCGTGCCGACGACGTCACCGTCGCCGACATCATC
ATCGCCGTGGACGAGCCGCTCGACGCCACCCAGTGCGGCGGCAAGGGCAACTGCGGCGGCGAGGAGCACTCGGGCCGCTG
CATGACGCACGACCTGTGGGCCACGCTGAACCAGAAGATGGTCGAATACCTCGATTCGGTGTCGCTGCAGAACCTGGTCG
ACCAGCAGCGCGAACGCCAGCCGGAAGTGCTGCAGGATATGCGCGATGCGCGCCCCGCCCGGCGCGACCGCGCTCCGGCA
CGCGCCCGTGCCGCGGAGGCGCCGCTGGCCGAGCCGGTGGCCGCCGAGCCGGTCAAGCGCGCGCCGCTGGTCAACTCCGT
TTTCAGCCTGGCGCAATCATGA

Upstream 100 bases:

>100_bases
AGCCCACTGCTGCAGCGCGGAAATTTCCCGACACCTTAGTTGACTGATTTTGTCGGGTTCCTTTATACTTGAGCAAAACG
ATCAGGTATTCCCCGACATC

Downstream 100 bases:

>100_bases
GTACGATCGCGACGGCATGACGACCGGGCGCCACGGCGCCGGTCCATACGAGAATATCGCCCCCACACAAGGCAGATCCG
ATAATGAGTACCCCACATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRGPGGGYSLARRADDVTVADII
IAVDEPLDATQCGGKGNCGGEEHSGRCMTHDLWATLNQKMVEYLDSVSLQNLVDQQRERQPEVLQDMRDARPARRDRAPA
RARAAEAPLAEPVAAEPVKRAPLVNSVFSLAQS

Sequences:

>Translated_193_residues
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRGPGGGYSLARRADDVTVADII
IAVDEPLDATQCGGKGNCGGEEHSGRCMTHDLWATLNQKMVEYLDSVSLQNLVDQQRERQPEVLQDMRDARPARRDRAPA
RARAAEAPLAEPVAAEPVKRAPLVNSVFSLAQS
>Mature_193_residues
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRGPGGGYSLARRADDVTVADII
IAVDEPLDATQCGGKGNCGGEEHSGRCMTHDLWATLNQKMVEYLDSVSLQNLVDQQRERQPEVLQDMRDARPARRDRAPA
RARAAEAPLAEPVAAEPVKRAPLVNSVFSLAQS

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=136, Percent_Identity=52.2058823529412, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 21187; Mature: 21187

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG
CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSGRCMTHDLWATLNQKM
CCCCHHHHHHCCCCCHHHHEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VEYLDSVSLQNLVDQQRERQPEVLQDMRDARPARRDRAPARARAAEAPLAEPVAAEPVKR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHHHCCCCCCCHHCCCHHH
APLVNSVFSLAQS
HHHHHHHHHHHCC
>Mature Secondary Structure
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG
CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSGRCMTHDLWATLNQKM
CCCCHHHHHHCCCCCHHHHEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VEYLDSVSLQNLVDQQRERQPEVLQDMRDARPARRDRAPARARAAEAPLAEPVAAEPVKR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHHHCCCCCCCHHCCCHHH
APLVNSVFSLAQS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA