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The map label for this gene is 17545710

Identifier: 17545710

GI number: 17545710

Start: 1043279

End: 1043779

Strand: Direct

Name: 17545710

Synonym: RSc0991

Alternate gene names: NA

Gene position: 1043279-1043779 (Clockwise)

Preceding gene: 17545709

Following gene: 17545713

Centisome position: 28.07

GC content: 70.86

Gene sequence:

>501_bases
ATGGCCGAAGCCTTGCCCGACCTGCAGCGCGGACTGGCGCCGATCCTCGATGCCGAGGTTCGCGTGCTGGTGCTCGGCAG
CTTTCCGGGCGAGGCTTCATTGGCGGCGCAGCAGTACTACGCTCATCCGCGCAACCAGTTCTGGCCGCTGATGGGTGCGC
TGCTCGACCTGCCGCTGCCCGCCATGCCGTATGCGGCGCGCGTGCGGGCGCTGCTGGCCCGCCACATCGGCGTGTGGGAT
GTGCTGGGCGCCTGCGTGCGCGAAGGCAGTCTCGATGCGGCGATCCGCCATCCGCAGGCCAACGATTTCGACCTGCTGCA
CCGGCGGGCGCCGAGGCTGCGGCGGGTGGGCTTCAATGGCGGCACGGCGGGCAGGTTCGCCAAGGATTTCGCCCGCGCCG
GCTTCGAGACGGTGGTGCTGCCGTCGTCCAGCCCGGCGCACGCGGCGCGCTCGTTCGAGCAGAAGCTTGCGCTGTGGCGC
TCGCTGTTGCCGGACGACTAG

Upstream 100 bases:

>100_bases
CACGTGCTGTTCGACCAGGCGCTGCTGGCCGAGGGCGGCTCGCTGGCCGATCCGGCCGACTACGTGCAGCGCGTCAACCG
CCTGCTGGCCTGACGCCGCC

Downstream 100 bases:

>100_bases
ATTAACGACAGGTTCTCCGGAACGCTGACGCCGGCCCTCGCCAAGCGCGAGGGCCGGCGTTTTCTTTTCGTGCGCGGCCG
TCAGCTCAACTCAACTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; Mug GT/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAEALPDLQRGLAPILDAEVRVLVLGSFPGEASLAAQQYYAHPRNQFWPLMGALLDLPLPAMPYAARVRALLARHIGVWD
VLGACVREGSLDAAIRHPQANDFDLLHRRAPRLRRVGFNGGTAGRFAKDFARAGFETVVLPSSSPAHAARSFEQKLALWR
SLLPDD

Sequences:

>Translated_166_residues
MAEALPDLQRGLAPILDAEVRVLVLGSFPGEASLAAQQYYAHPRNQFWPLMGALLDLPLPAMPYAARVRALLARHIGVWD
VLGACVREGSLDAAIRHPQANDFDLLHRRAPRLRRVGFNGGTAGRFAKDFARAGFETVVLPSSSPAHAARSFEQKLALWR
SLLPDD
>Mature_165_residues
AEALPDLQRGLAPILDAEVRVLVLGSFPGEASLAAQQYYAHPRNQFWPLMGALLDLPLPAMPYAARVRALLARHIGVWDV
LGACVREGSLDAAIRHPQANDFDLLHRRAPRLRRVGFNGGTAGRFAKDFARAGFETVVLPSSSPAHAARSFEQKLALWRS
LLPDD

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18186; Mature: 18055

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEALPDLQRGLAPILDAEVRVLVLGSFPGEASLAAQQYYAHPRNQFWPLMGALLDLPLP
CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
AMPYAARVRALLARHIGVWDVLGACVREGSLDAAIRHPQANDFDLLHRRAPRLRRVGFNG
CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHCHHHHHCCCCC
GTAGRFAKDFARAGFETVVLPSSSPAHAARSFEQKLALWRSLLPDD
CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEALPDLQRGLAPILDAEVRVLVLGSFPGEASLAAQQYYAHPRNQFWPLMGALLDLPLP
CCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
AMPYAARVRALLARHIGVWDVLGACVREGSLDAAIRHPQANDFDLLHRRAPRLRRVGFNG
CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHCHHHHHCCCCC
GTAGRFAKDFARAGFETVVLPSSSPAHAARSFEQKLALWRSLLPDD
CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA