| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hptG
Identifier: 17545709
GI number: 17545709
Start: 1041349
End: 1043271
Strand: Direct
Name: hptG
Synonym: RSc0990
Alternate gene names: 17545709
Gene position: 1041349-1043271 (Clockwise)
Preceding gene: 17545708
Following gene: 17545710
Centisome position: 28.02
GC content: 66.72
Gene sequence:
>1923_bases ATGGGTGCACCGCACGAGAAGATGGCGTTCCAGGCAGAGGTCAAGCAGCTTCTGCATCTGATGATCCATTCCCTGTACAG CAACAAGGAAATCTTTCTGCGCGAGCTGGTCTCCAACGCGTCCGACGCCGTGGACAAGCTGCGCTTCGAGGGCATCGCCG ACCCATCGCTGCTCGAAGGCGGCGGCGAGCTGGGCATCCGCATCGGTTTCGATGCCCAGGCCCGCACCGTCACCATCGCC GACAACGGCATCGGCATGAGCCGCGACGAGGCCATCCGCAACCTCGGCACCATCGCCCGCTCGGGCACGCGCGAGTTCTT CAGCCAGCTCTCCGGCGATCAGCAGAAAGACGCGGCGCTGATCGGCCAGTTCGGGGTCGGCTTCTATTCGGCCTTCATCG TCGCCGACCGCGTGACGGTGGAATCGCGCCGTGCGGGCGTGCCCGCCGCCGAAGGCGTGCGCTGGGAAAGCGCGGGCGAC GGCGAGTTCACCGTCGATGCCATCGAGCGCGCCGAGCGCGGCACCACCATCACGCTGCACCTGCGCGAGGGCGAGGACGA TTTCCTCTCCGCCTGGCGCCTGAAGTCCATCGTGCAGAAGTACTCGGACCACATCTCCCTGCCGATCGCGATGCGCAAGG AGAGCTGGGACGAAGAGAAGAAAGAGATGGTCGCGCAGGACGAATGGGAGACCATCAACCAGGCCAGCGCCCTGTGGGCC CGCCCGCGCGCCGACGTGACCGACGAGCAGTACATCGCCTTCTACCAGCACATCGCACACGAGCAGGGCCAGCCGCTGGC GTGGACGCACAACCGCGTCGAAGGCCGCAGCGAATACACGCAGCTGCTGTACCTCCCGACCAACGCGCCGTTCGACCTGT GGGACCGCGAGCGCCGCAGCGGCCTGAAGCTGTACGTCAAGCGCGTCTTCATCATGGACGACGCCGAACAGCTGCTGCCG GCCTACCTGCGCTTCGTCAAGGGCGTGATCGACTCGGCCGACCTGCCGCTGAACGTCTCGCGCGAGATCCTGCAGGAGAG CCGCGACGTGAAGGCCATCCGAGAGGGCTCGACCAAGCGCGTGCTGGGCATGCTCGAATCGATGGCCGACTCGGATGACG CCGCCGAAAAGGACAAGTACGCCACCTTCTGGCAGCACTTCGGCCAGGTGCTCAAGGAAGGCCTCGGCGAAGACTTCGCC AACAAGGACCGTATCGCCAAGCTGCTGCGCTTTGCTTCCACGCACAACGCAGGGGACGAGCAGACCGTCTCGCTGGCCGA CTACATCGGCCGCATGAAGGACGGCCAGGACAAGATCTACTACGTGAGCGCCGAGAACTGGACGGCCGCCAAGTCCGGCC CGCACCTGGAGGTGTTCCGCAAGAAGGGCGTGGAAGTGTTGCTGCTGACCGACCGCGTGGACGAATGGATGCTGTCGTTC CTGCACGACTTCGAAGAGAAGGCGCTGGTGTCGGTCGCGCGCGGCGGGCTGGACCTCGGCGCGCTGGAAGACGAAGCCGA GCGCGCCGAGCACGCCAAGGTGGAAGGCGAGTTCAAGCCGCTGGTGGACCGCGCCAAGGCGGTGCTGGCCGACAAGGCCA AGGACGTGCGCATCACGCATCGCCTGACCGATTCGCCGTCGTGCCTGGTGGCCGACGAGGGCGACATCAGCGGCACGCTG GCGCGCCTGCTCAAGCAGGCCGGCCAGAAGGCGCCCGACACCAAGCCCGTGCTGGAACTGAACCCGGCACACCCGCTGGT GCGCAAGCTGGCGTTGCTCGAATCCGTCACCGGCGGCGAGGCCGACCGCGCTGCGTTCGAGGATCGCCTGCACGTGCTGT TCGACCAGGCGCTGCTGGCCGAGGGCGGCTCGCTGGCCGATCCGGCCGACTACGTGCAGCGCGTCAACCGCCTGCTGGCC TGA
Upstream 100 bases:
>100_bases AAAACGGCTCCGCCGCCCCATCTCCAGTTCACGCGGACCGCCCGCTGGGTGCGGTCCGCTTCGCTTTCTCCATCACATCC TTCGAACCAAGAGACACACC
Downstream 100 bases:
>100_bases CGCCGCCATGGCCGAAGCCTTGCCCGACCTGCAGCGCGGACTGGCGCCGATCCTCGATGCCGAGGTTCGCGTGCTGGTGC TCGGCAGCTTTCCGGGCGAG
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MGAPHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELGIRIGFDAQARTVTIA DNGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAALIGQFGVGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGD GEFTVDAIERAERGTTITLHLREGEDDFLSAWRLKSIVQKYSDHISLPIAMRKESWDEEKKEMVAQDEWETINQASALWA RPRADVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWDRERRSGLKLYVKRVFIMDDAEQLLP AYLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKRVLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFA NKDRIAKLLRFASTHNAGDEQTVSLADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSF LHDFEEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLADKAKDVRITHRLTDSPSCLVADEGDISGTL ARLLKQAGQKAPDTKPVLELNPAHPLVRKLALLESVTGGEADRAAFEDRLHVLFDQALLAEGGSLADPADYVQRVNRLLA
Sequences:
>Translated_640_residues MGAPHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELGIRIGFDAQARTVTIA DNGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAALIGQFGVGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGD GEFTVDAIERAERGTTITLHLREGEDDFLSAWRLKSIVQKYSDHISLPIAMRKESWDEEKKEMVAQDEWETINQASALWA RPRADVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWDRERRSGLKLYVKRVFIMDDAEQLLP AYLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKRVLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFA NKDRIAKLLRFASTHNAGDEQTVSLADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSF LHDFEEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLADKAKDVRITHRLTDSPSCLVADEGDISGTL ARLLKQAGQKAPDTKPVLELNPAHPLVRKLALLESVTGGEADRAAFEDRLHVLFDQALLAEGGSLADPADYVQRVNRLLA >Mature_639_residues GAPHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELGIRIGFDAQARTVTIAD NGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAALIGQFGVGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGDG EFTVDAIERAERGTTITLHLREGEDDFLSAWRLKSIVQKYSDHISLPIAMRKESWDEEKKEMVAQDEWETINQASALWAR PRADVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWDRERRSGLKLYVKRVFIMDDAEQLLPA YLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKRVLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFAN KDRIAKLLRFASTHNAGDEQTVSLADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSFL HDFEEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLADKAKDVRITHRLTDSPSCLVADEGDISGTLA RLLKQAGQKAPDTKPVLELNPAHPLVRKLALLESVTGGEADRAAFEDRLHVLFDQALLAEGGSLADPADYVQRVNRLLA
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI4507677, Length=694, Percent_Identity=39.3371757925072, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI20149594, Length=691, Percent_Identity=38.0607814761216, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI155722983, Length=643, Percent_Identity=35.1477449455677, Blast_Score=355, Evalue=1e-97, Organism=Homo sapiens, GI154146191, Length=419, Percent_Identity=36.0381861575179, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI153792590, Length=419, Percent_Identity=36.0381861575179, Blast_Score=259, Evalue=7e-69, Organism=Escherichia coli, GI1786679, Length=637, Percent_Identity=58.0847723704867, Blast_Score=756, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=680, Percent_Identity=38.2352941176471, Blast_Score=452, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17542208, Length=685, Percent_Identity=38.8321167883212, Blast_Score=425, Evalue=1e-119, Organism=Caenorhabditis elegans, GI115535205, Length=660, Percent_Identity=32.5757575757576, Blast_Score=320, Evalue=2e-87, Organism=Caenorhabditis elegans, GI115535167, Length=440, Percent_Identity=34.7727272727273, Blast_Score=261, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6323840, Length=683, Percent_Identity=37.4816983894583, Blast_Score=444, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6325016, Length=687, Percent_Identity=36.8267831149927, Blast_Score=439, Evalue=1e-124, Organism=Drosophila melanogaster, GI17647529, Length=696, Percent_Identity=37.3563218390805, Blast_Score=459, Evalue=1e-129, Organism=Drosophila melanogaster, GI21357739, Length=687, Percent_Identity=36.2445414847162, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI24586016, Length=670, Percent_Identity=33.2835820895522, Blast_Score=339, Evalue=4e-93,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_RALSO (Q8Y0Q3)
Other databases:
- EMBL: AL646052 - RefSeq: NP_519111.1 - ProteinModelPortal: Q8Y0Q3 - GeneID: 1219799 - GenomeReviews: AL646052_GR - KEGG: rso:RSc0990 - NMPDR: fig|267608.1.peg.990 - HOGENOM: HBG631012 - OMA: AIYYITA - ProtClustDB: PRK05218 - BioCyc: RSOL267608:RSC0990-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71408; Mature: 71277
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEG CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC GGELGIRIGFDAQARTVTIADNGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAAL CCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IGQFGVGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGDGEFTVDAIERAERGTTITLH HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEECCCCCCCEEHHHHHHHCCCCEEEEE LREGEDDFLSAWRLKSIVQKYSDHISLPIAMRKESWDEEKKEMVAQDEWETINQASALWA EECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC RPRADVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWDRERRS CCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHC GLKLYVKRVFIMDDAEQLLPAYLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKR CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH VLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDRIAKLLRFASTHNAGDE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC QTVSLADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSF HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEECHHHHHHHHH LHDFEEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLADKAKDVRITH HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE RLTDSPSCLVADEGDISGTLARLLKQAGQKAPDTKPVLELNPAHPLVRKLALLESVTGGE EECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC ADRAAFEDRLHVLFDQALLAEGGSLADPADYVQRVNRLLA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure GAPHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEG CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC GGELGIRIGFDAQARTVTIADNGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAAL CCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IGQFGVGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGDGEFTVDAIERAERGTTITLH HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEECCCCCCCEEHHHHHHHCCCCEEEEE LREGEDDFLSAWRLKSIVQKYSDHISLPIAMRKESWDEEKKEMVAQDEWETINQASALWA EECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC RPRADVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWDRERRS CCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHC GLKLYVKRVFIMDDAEQLLPAYLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKR CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH VLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDRIAKLLRFASTHNAGDE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC QTVSLADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSF HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEECHHHHHHHHH LHDFEEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLADKAKDVRITH HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE RLTDSPSCLVADEGDISGTLARLLKQAGQKAPDTKPVLELNPAHPLVRKLALLESVTGGE EECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC ADRAAFEDRLHVLFDQALLAEGGSLADPADYVQRVNRLLA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852