| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is aroA
Identifier: 17545626
GI number: 17545626
Start: 958441
End: 959751
Strand: Direct
Name: aroA
Synonym: RSc0907
Alternate gene names: 17545626
Gene position: 958441-959751 (Clockwise)
Preceding gene: 17545625
Following gene: 17545627
Centisome position: 25.79
GC content: 69.72
Gene sequence:
>1311_bases ATGGAACACCTCGACGTCGGTCCGCTGAAGGCGGCGCGCGGCACGGTCAAGCTGCCGGGCTCGAAGAGCATCTCCAACCG CGTGCTGCTGCTGGCCGCCCTCGCCGAGGGCGAGACCGTCGTGCGCGACCTGCTCGATTCCGACGACACCCGCGTGATGC TGGCCGCGCTCGACACGCTCGGCGTGCGATGCGAGCCCCTCGGCACCGCCAACGCCTATCGCGTGACCGGCACGGGCGGT CGTTTCCCGGCCAAGTCCGCCGATCTGTTCATGGGCAACGCCGGCACCGCCATCCGCCCGCTGACGGCGGCCCTGGCGCT GCAGGGCGGCGAGTACACGCTGCACGGCGTGCCGCGCATGCACGAGCGGCCGATCGGCGATCTGGTCGACGGCCTGCGGC AAGTCGGCGCGCGCATCGACTACACCGGCAATGAAGGTTTCCCGCCGCTGGCGATCCGCGCGGCCTCCATCCGGATCGAC GCGCCGATCCGCGTGCGCGGCGATGTGTCGAGCCAGTTCCTGACCGCGCTACTGATGGCGCTGCCGCTGGTGGAGGGGAG CGGTCGGCCGGTGACCATCGAGGTGGTCGGCGAGCTGATCTCGAAGCCGTACATCGAAATCACGCTCAACCTGATGGCGC GCTTCGGAGTACAGGTCGAGCGCAACGGCTGGGCGTCGTTCAGCGTGCCGACCGGCGTGGCTTACCGTGCGCCGGGCGAG ATCTTTGTCGAGGGCGACGCGTCGTCCGCGTCGTACTTCCTGGCGGCGGGCGCGCTCGGCGGCGGGCCGGTGCGCGTGGA AGGGGTCGGCATGTCGAGCATCCAGGGCGACGTGCGCTTTGCCGATGCGCTCAATCGCATGGGCGCCAACGTCATGGCCG GCGACAACTGGATCGAAGTGCGGGGCGTGGAGCGCGACGACGGCAAGCTGCATGCGCTGGAGCTCGACTGCAATCACATC CCCGATGCCGCCATGACGCTGGCGGTGGCCGCGCTGTTCGCCGATGGCACCACCACGCTGACCAACATCGGCAGTTGGCG CGTCAAGGAGACCGACCGGCTGACCGCGATGGCCACCGAGCTGCGCAAGCTTGGCGCCGCGGTGGAAGAGGGCACCGACT ACATCCGCGTGACCCCGCCGTCGCACTGGACCGCGCCTGCCGGCGGGATCGACACCTACGACGATCACCGCATGGCGATG GCCTTTTCGCTGGCGGCCTTCGGCCCGGTGCCGGTACGCATCAATGACCCGCGCTGCGTGGCCAAGACGTTCCCCGAATA CTTCACGGCGTTCGGCGGAATCGCCGCCTGA
Upstream 100 bases:
>100_bases CGAGCGCGTGTTCCGCCGCGCCAGCGAAGCGCGCCTGGCCTGGCCGCAGCGCGCGGCCTCCGCCACACAACCCGAATAAC GTTTCTCTCTGACTGGATCC
Downstream 100 bases:
>100_bases AACGCAATTAACCGCCAATCATCATGTCTGACGTTGCTGCTTTTACCGCGTACCCGGTCATCGCCATCGACGGTCCGACC GCGTCCGGCAAGGGCACGGT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MEHLDVGPLKAARGTVKLPGSKSISNRVLLLAALAEGETVVRDLLDSDDTRVMLAALDTLGVRCEPLGTANAYRVTGTGG RFPAKSADLFMGNAGTAIRPLTAALALQGGEYTLHGVPRMHERPIGDLVDGLRQVGARIDYTGNEGFPPLAIRAASIRID APIRVRGDVSSQFLTALLMALPLVEGSGRPVTIEVVGELISKPYIEITLNLMARFGVQVERNGWASFSVPTGVAYRAPGE IFVEGDASSASYFLAAGALGGGPVRVEGVGMSSIQGDVRFADALNRMGANVMAGDNWIEVRGVERDDGKLHALELDCNHI PDAAMTLAVAALFADGTTTLTNIGSWRVKETDRLTAMATELRKLGAAVEEGTDYIRVTPPSHWTAPAGGIDTYDDHRMAM AFSLAAFGPVPVRINDPRCVAKTFPEYFTAFGGIAA
Sequences:
>Translated_436_residues MEHLDVGPLKAARGTVKLPGSKSISNRVLLLAALAEGETVVRDLLDSDDTRVMLAALDTLGVRCEPLGTANAYRVTGTGG RFPAKSADLFMGNAGTAIRPLTAALALQGGEYTLHGVPRMHERPIGDLVDGLRQVGARIDYTGNEGFPPLAIRAASIRID APIRVRGDVSSQFLTALLMALPLVEGSGRPVTIEVVGELISKPYIEITLNLMARFGVQVERNGWASFSVPTGVAYRAPGE IFVEGDASSASYFLAAGALGGGPVRVEGVGMSSIQGDVRFADALNRMGANVMAGDNWIEVRGVERDDGKLHALELDCNHI PDAAMTLAVAALFADGTTTLTNIGSWRVKETDRLTAMATELRKLGAAVEEGTDYIRVTPPSHWTAPAGGIDTYDDHRMAM AFSLAAFGPVPVRINDPRCVAKTFPEYFTAFGGIAA >Mature_436_residues MEHLDVGPLKAARGTVKLPGSKSISNRVLLLAALAEGETVVRDLLDSDDTRVMLAALDTLGVRCEPLGTANAYRVTGTGG RFPAKSADLFMGNAGTAIRPLTAALALQGGEYTLHGVPRMHERPIGDLVDGLRQVGARIDYTGNEGFPPLAIRAASIRID APIRVRGDVSSQFLTALLMALPLVEGSGRPVTIEVVGELISKPYIEITLNLMARFGVQVERNGWASFSVPTGVAYRAPGE IFVEGDASSASYFLAAGALGGGPVRVEGVGMSSIQGDVRFADALNRMGANVMAGDNWIEVRGVERDDGKLHALELDCNHI PDAAMTLAVAALFADGTTTLTNIGSWRVKETDRLTAMATELRKLGAAVEEGTDYIRVTPPSHWTAPAGGIDTYDDHRMAM AFSLAAFGPVPVRINDPRCVAKTFPEYFTAFGGIAA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=436, Percent_Identity=55.045871559633, Blast_Score=435, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6320332, Length=449, Percent_Identity=39.4209354120267, Blast_Score=246, Evalue=5e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_RALSO (Q8Y0Y6)
Other databases:
- EMBL: AL646052 - RefSeq: NP_519028.1 - ProteinModelPortal: Q8Y0Y6 - SMR: Q8Y0Y6 - GeneID: 1219715 - GenomeReviews: AL646052_GR - KEGG: rso:RSc0907 - NMPDR: fig|267608.1.peg.907 - HOGENOM: HBG646626 - OMA: GADIEWG - ProtClustDB: PRK02427 - BioCyc: RSOL267608:RSC0907-MONOMER - BRENDA: 2.5.1.19 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 46145; Mature: 46145
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHLDVGPLKAARGTVKLPGSKSISNRVLLLAALAEGETVVRDLLDSDDTRVMLAALDTL CCCCCCCCCHHCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEHHHC GVRCEPLGTANAYRVTGTGGRFPAKSADLFMGNAGTAIRPLTAALALQGGEYTLHGVPRM CCEECCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHEEECCCCEEEECCCCH HERPIGDLVDGLRQVGARIDYTGNEGFPPLAIRAASIRIDAPIRVRGDVSSQFLTALLMA HCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEEEEECCCEEEECCCHHHHHHHHHHH LPLVEGSGRPVTIEVVGELISKPYIEITLNLMARFGVQVERNGWASFSVPTGVAYRAPGE HHHCCCCCCEEEHHHHHHHHCCCEEEEEHEEHHHCCCEEECCCCEEECCCCCEEEECCCC IFVEGDASSASYFLAAGALGGGPVRVEGVGMSSIQGDVRFADALNRMGANVMAGDNWIEV EEEECCCCCCEEEEEECCCCCCCEEEEECCHHHCCCCHHHHHHHHHCCCEEEECCCEEEE RGVERDDGKLHALELDCNHIPDAAMTLAVAALFADGTTTLTNIGSWRVKETDRLTAMATE EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEECCCHHHHHHHHH LRKLGAAVEEGTDYIRVTPPSHWTAPAGGIDTYDDHRMAMAFSLAAFGPVPVRINDPRCV HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEEEHHHCCCEEEEECCCCHH AKTFPEYFTAFGGIAA HHHHHHHHHHHCCCCC >Mature Secondary Structure MEHLDVGPLKAARGTVKLPGSKSISNRVLLLAALAEGETVVRDLLDSDDTRVMLAALDTL CCCCCCCCCHHCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEHHHC GVRCEPLGTANAYRVTGTGGRFPAKSADLFMGNAGTAIRPLTAALALQGGEYTLHGVPRM CCEECCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHEEECCCCEEEECCCCH HERPIGDLVDGLRQVGARIDYTGNEGFPPLAIRAASIRIDAPIRVRGDVSSQFLTALLMA HCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEEEEECCCEEEECCCHHHHHHHHHHH LPLVEGSGRPVTIEVVGELISKPYIEITLNLMARFGVQVERNGWASFSVPTGVAYRAPGE HHHCCCCCCEEEHHHHHHHHCCCEEEEEHEEHHHCCCEEECCCCEEECCCCCEEEECCCC IFVEGDASSASYFLAAGALGGGPVRVEGVGMSSIQGDVRFADALNRMGANVMAGDNWIEV EEEECCCCCCEEEEEECCCCCCCEEEEECCHHHCCCCHHHHHHHHHCCCEEEECCCEEEE RGVERDDGKLHALELDCNHIPDAAMTLAVAALFADGTTTLTNIGSWRVKETDRLTAMATE EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEECCCHHHHHHHHH LRKLGAAVEEGTDYIRVTPPSHWTAPAGGIDTYDDHRMAMAFSLAAFGPVPVRINDPRCV HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEEEHHHCCCEEEEECCCCHH AKTFPEYFTAFGGIAA HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852