| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545593
Identifier: 17545593
GI number: 17545593
Start: 909315
End: 909710
Strand: Direct
Name: 17545593
Synonym: RSc0874
Alternate gene names: NA
Gene position: 909315-909710 (Clockwise)
Preceding gene: 17545592
Following gene: 17545594
Centisome position: 24.47
GC content: 68.18
Gene sequence:
>396_bases ATGCAATTGAAGAACCTGGCGGACGGCGCGGTCCTCGCGCTGCCCGATGACCTGCTATGGGCGGACGAACACGCCTGGAC GCCCGCCGTGGCGGCAGTGTCGTACCTGCTGACCGGCGCGCTGCTGGTCGAGTCGGCTGCCCGCCAGAAGGGGCGGCCCA TCACGCTGGTGGGTGCCGCCGACATGGCCTGGGTGACCCGCGCGACGGTGAACACGCTGTACGCGTGGGCGGCGACACCC GCTCGGCAATTCGAACTGACCCACACCGATGGCCGCGTCTTCACCGTCGCGTTTCGCCATCACGAAACCGCCATCGAGGC CGAGCCGGTGACCGGTTTCCCGGCCCGGCGCGACGCCGACTTTTACCGATTGACCCTCCGTCTGATGGAGATCTGA
Upstream 100 bases:
>100_bases CCTCCGGCGGCCGGACGGTCGCCGCCACCATCGATGCCCGCGATGAAGCGCGGCTACTCGAACTTCTCAAAGAAGCCCAA TCCCGGGCGCTGTAACTCCG
Downstream 100 bases:
>100_bases ATGCCGATTCTTTCCGGCGACGTGAAGCTGCTCGCCGCCGAGCGCCTGCTCGACACCCCCGACGGCGGCGGTCGTATGAC CGGCCACGTCGTGATCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MQLKNLADGAVLALPDDLLWADEHAWTPAVAAVSYLLTGALLVESAARQKGRPITLVGAADMAWVTRATVNTLYAWAATP ARQFELTHTDGRVFTVAFRHHETAIEAEPVTGFPARRDADFYRLTLRLMEI
Sequences:
>Translated_131_residues MQLKNLADGAVLALPDDLLWADEHAWTPAVAAVSYLLTGALLVESAARQKGRPITLVGAADMAWVTRATVNTLYAWAATP ARQFELTHTDGRVFTVAFRHHETAIEAEPVTGFPARRDADFYRLTLRLMEI >Mature_131_residues MQLKNLADGAVLALPDDLLWADEHAWTPAVAAVSYLLTGALLVESAARQKGRPITLVGAADMAWVTRATVNTLYAWAATP ARQFELTHTDGRVFTVAFRHHETAIEAEPVTGFPARRDADFYRLTLRLMEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14447; Mature: 14447
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKNLADGAVLALPDDLLWADEHAWTPAVAAVSYLLTGALLVESAARQKGRPITLVGAA CCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC DMAWVTRATVNTLYAWAATPARQFELTHTDGRVFTVAFRHHETAIEAEPVTGFPARRDAD CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCH FYRLTLRLMEI HHHEEEEEECC >Mature Secondary Structure MQLKNLADGAVLALPDDLLWADEHAWTPAVAAVSYLLTGALLVESAARQKGRPITLVGAA CCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC DMAWVTRATVNTLYAWAATPARQFELTHTDGRVFTVAFRHHETAIEAEPVTGFPARRDAD CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCH FYRLTLRLMEI HHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA