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The map label for this gene is tISRso9

Identifier: 17545562

GI number: 17545562

Start: 883334

End: 884656

Strand: Direct

Name: tISRso9

Synonym: RSc0843

Alternate gene names: NA

Gene position: 883334-884656 (Clockwise)

Preceding gene: 17545561

Following gene: 17545563

Centisome position: 23.77

GC content: 64.17

Gene sequence:

>1323_bases
ATGGGTCCGAAGGCACCAGTCAGCGAGGGAGACTTCTTCCGGCAGCCGCTGCGCGAGCAGATCAACCTGAAGCATCCGCT
GGTACGCCTGGCCGATCTGATCGACTGGGAGCGGTTGAGCGCCGTGATGAGCGAGAGCTTCGTGTCCAAGCGCGGCCGCC
CGGCCACCTCGCCACGCTTGATTGCTGGCTTGCTGTATTTGCAGCACGCGTTTGACCTGTCCGATGAGGAAGTCGTCTGG
CAATGGGTTGAGAACCCGTACTGGCAGGTATTCACTGGCGAGACGTACCTGCAGACCGAGCCGCCGATCGACCCGTCGAG
CCTGACGCGCTGGCGCAAGCGGTTGGGCGAAGCAGGCGTGGAAGAGCTGCTGGCCGAGACGATCGGAGTGGCCAAACGAG
CCGGGGTGATCAAGGCCGCCAGCATCAAGCGCGTGATCGTCGACACGACGGTGATGCCGAAGGCAATCGCACATCCGACC
GATTCGCGCTTGCTGGAACGATGTCGCGAGCATCTGGTGAAGGCGGCAGCCCAGCACGGGCTAAAACTACGACAGAACTA
CAACCGCGAGGCGCCACGGCTGGCGGGCCAGATTGGCCGCTACGCACACGCCAAGCAGTACAAGCGCATGAAGCGCGCGC
TGCGCACCTTGCGCTCGCGGGTGGGTCGGGTGATGCGCGACGTTGAGCGACAGCTCGGCGCGGTGGCGGCGCAAAGCCGC
ACAGCGCTGGAAGACCTGATTGGCCGCACCAAGCGGATTCTGTCGCAGAAGCCTAAGGACAAGCACAAGCTCTACGCGCT
GCATGCGCCGGAGGTGGAATGCATCAGCAAGGGCAAGGCCAGAACGCCGTACGAGTTCGGCGTGAAGGTGTCGATCACGA
CCACACACAAGGAAGGGCTGGTGCTGGGCGCGCGCTCGATGCCGGGCAATCCGTACGACGGGCACACGCTGGCCGAGGCG
CTGGAGCAGGCAGAGATTCTCAGTGACGCGCGAGCGCAGATTGCCATCGTTGATCGTGGTTACCGGGGCGTCGACGTTGA
AGGCGTGAAGGTCTACCACCCTGGGCTTCGGCGCGGCATCACGCGTGGCCTGCGCGCGATGATCCGACGGCGCAGTGCCA
TCGAACCCGCCATCGGCCACATGAAGGCCGACGGCAAGCTCGACCGGAACTGGCTCAAAGGGTCACTGGGCGACGCGATG
CATGCGGTGCTCTGCGGCGCTGGCCACAACCTGCGCATGATCCTGAGGAAGCTGCGGCTTCTTTACGCCGTCATTCTTGC
CGCGCTGCTTGGACGAATCCGCCCTTGTGCATTGCCGGTATGA

Upstream 100 bases:

>100_bases
AGCCTTGAAGTACAAGGCGTTGCAGCCGAAACGGTGTTGTAGGAATTGCAGGAGGCGTGCATATTGGCGCGATCATCCTG
CAAATTTCGTTGAGGTTTGA

Downstream 100 bases:

>100_bases
AATCGGCACCACAGGAAAACGAATTGTTCAGGACGGACTCCTTACGCCCGCAATCCCCGCACCCACAGCGACGAGCAGGT
GGCGAGGATCGCCGCCAGCA

Product: IRSO9 transposase

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MGPKAPVSEGDFFRQPLREQINLKHPLVRLADLIDWERLSAVMSESFVSKRGRPATSPRLIAGLLYLQHAFDLSDEEVVW
QWVENPYWQVFTGETYLQTEPPIDPSSLTRWRKRLGEAGVEELLAETIGVAKRAGVIKAASIKRVIVDTTVMPKAIAHPT
DSRLLERCREHLVKAAAQHGLKLRQNYNREAPRLAGQIGRYAHAKQYKRMKRALRTLRSRVGRVMRDVERQLGAVAAQSR
TALEDLIGRTKRILSQKPKDKHKLYALHAPEVECISKGKARTPYEFGVKVSITTTHKEGLVLGARSMPGNPYDGHTLAEA
LEQAEILSDARAQIAIVDRGYRGVDVEGVKVYHPGLRRGITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAM
HAVLCGAGHNLRMILRKLRLLYAVILAALLGRIRPCALPV

Sequences:

>Translated_440_residues
MGPKAPVSEGDFFRQPLREQINLKHPLVRLADLIDWERLSAVMSESFVSKRGRPATSPRLIAGLLYLQHAFDLSDEEVVW
QWVENPYWQVFTGETYLQTEPPIDPSSLTRWRKRLGEAGVEELLAETIGVAKRAGVIKAASIKRVIVDTTVMPKAIAHPT
DSRLLERCREHLVKAAAQHGLKLRQNYNREAPRLAGQIGRYAHAKQYKRMKRALRTLRSRVGRVMRDVERQLGAVAAQSR
TALEDLIGRTKRILSQKPKDKHKLYALHAPEVECISKGKARTPYEFGVKVSITTTHKEGLVLGARSMPGNPYDGHTLAEA
LEQAEILSDARAQIAIVDRGYRGVDVEGVKVYHPGLRRGITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAM
HAVLCGAGHNLRMILRKLRLLYAVILAALLGRIRPCALPV
>Mature_439_residues
GPKAPVSEGDFFRQPLREQINLKHPLVRLADLIDWERLSAVMSESFVSKRGRPATSPRLIAGLLYLQHAFDLSDEEVVWQ
WVENPYWQVFTGETYLQTEPPIDPSSLTRWRKRLGEAGVEELLAETIGVAKRAGVIKAASIKRVIVDTTVMPKAIAHPTD
SRLLERCREHLVKAAAQHGLKLRQNYNREAPRLAGQIGRYAHAKQYKRMKRALRTLRSRVGRVMRDVERQLGAVAAQSRT
ALEDLIGRTKRILSQKPKDKHKLYALHAPEVECISKGKARTPYEFGVKVSITTTHKEGLVLGARSMPGNPYDGHTLAEAL
EQAEILSDARAQIAIVDRGYRGVDVEGVKVYHPGLRRGITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMH
AVLCGAGHNLRMILRKLRLLYAVILAALLGRIRPCALPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772 [H]

EC number: NA

Molecular weight: Translated: 49283; Mature: 49152

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPKAPVSEGDFFRQPLREQINLKHPLVRLADLIDWERLSAVMSESFVSKRGRPATSPRL
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IAGLLYLQHAFDLSDEEVVWQWVENPYWQVFTGETYLQTEPPIDPSSLTRWRKRLGEAGV
HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHH
EELLAETIGVAKRAGVIKAASIKRVIVDTTVMPKAIAHPTDSRLLERCREHLVKAAAQHG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
LKLRQNYNREAPRLAGQIGRYAHAKQYKRMKRALRTLRSRVGRVMRDVERQLGAVAAQSR
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALEDLIGRTKRILSQKPKDKHKLYALHAPEVECISKGKARTPYEFGVKVSITTTHKEGL
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHCCCCCCCCHHCCEEEEEEEECCCCE
VLGARSMPGNPYDGHTLAEALEQAEILSDARAQIAIVDRGYRGVDVEGVKVYHPGLRRGI
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCHHHHHH
TRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMHAVLCGAGHNLRMILRKLRL
HHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LYAVILAALLGRIRPCALPV
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GPKAPVSEGDFFRQPLREQINLKHPLVRLADLIDWERLSAVMSESFVSKRGRPATSPRL
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IAGLLYLQHAFDLSDEEVVWQWVENPYWQVFTGETYLQTEPPIDPSSLTRWRKRLGEAGV
HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHH
EELLAETIGVAKRAGVIKAASIKRVIVDTTVMPKAIAHPTDSRLLERCREHLVKAAAQHG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
LKLRQNYNREAPRLAGQIGRYAHAKQYKRMKRALRTLRSRVGRVMRDVERQLGAVAAQSR
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALEDLIGRTKRILSQKPKDKHKLYALHAPEVECISKGKARTPYEFGVKVSITTTHKEGL
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHCCCCCCCCHHCCEEEEEEEECCCCE
VLGARSMPGNPYDGHTLAEALEQAEILSDARAQIAIVDRGYRGVDVEGVKVYHPGLRRGI
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCHHHHHH
TRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMHAVLCGAGHNLRMILRKLRL
HHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LYAVILAALLGRIRPCALPV
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8429568 [H]