Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17230991
Identifier: 17230991
GI number: 17230991
Start: 4213299
End: 4213886
Strand: Reverse
Name: 17230991
Synonym: all3499
Alternate gene names: NA
Gene position: 4213886-4213299 (Counterclockwise)
Preceding gene: 17230992
Following gene: 17230981
Centisome position: 65.7
GC content: 44.39
Gene sequence:
>588_bases ATGGTTGCCAATCCTGAAATTTGTCGAGCCAATGGAAAAAAATCTCGTGGCCCAGTTACACAAAAGGGCAAATCTATTGC TTCTGGAAACTCTACACGACATGGGTTACTGTCGGTTAATCCACCGTTAGTAATGGGTGAAGATTTAGAGGTATTTCCAG GCTTTGTACAGTCCTTAATTGACGAATATCAACCAACAACTGCTACGGAAAAACTGCTGGTGCAGCAAGTGGCAATGGGT TGGCTAAAGTTAAGTCGGCTTTGGCAGGCGGAGGCGGCGATCGCCAATCTCTCTATTTTAAGGGCTGAAATGAATTTTAA ATTTCCCGATGCCTTGCAATCACTCATTGATTTGGGGAGCGATAGAAGTGGGGGTGCAGAACTGAAAAGTTTGCAGGCAC AGATTAGGGAAGAGGAGAAAAAATCCCTGGCTTTGCCGCAAGATACAGATAAATTAGCTCGATATGAGCGGCACATTTCA AGAGGTCTGAACCAAGCATTAGAGCATTTGGCAACCCTCCACCAGCAACGGCAGAATAAGGATTCTATGGGTTCGTATGG TTATAAAACAGTCCAGCTAGTTAAATAG
Upstream 100 bases:
>100_bases ACTTGACTTGCGACTTTATACATACACAAATTGTATTAGTTCTTCCACTTGTGAAGAAATAAAAGCGATGAATATACTAT TAATTTTGTAAGAGAAGCTT
Downstream 100 bases:
>100_bases CAGATTCAGGATTTCAGTTTCGGGTGTTTGATCTGCGTGCCTTCAATGGTTGTGCTGTGATTGAGAAAATTCTCTACTGT AAATCACAAAGATTTATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVANPEICRANGKKSRGPVTQKGKSIASGNSTRHGLLSVNPPLVMGEDLEVFPGFVQSLIDEYQPTTATEKLLVQQVAMG WLKLSRLWQAEAAIANLSILRAEMNFKFPDALQSLIDLGSDRSGGAELKSLQAQIREEEKKSLALPQDTDKLARYERHIS RGLNQALEHLATLHQQRQNKDSMGSYGYKTVQLVK
Sequences:
>Translated_195_residues MVANPEICRANGKKSRGPVTQKGKSIASGNSTRHGLLSVNPPLVMGEDLEVFPGFVQSLIDEYQPTTATEKLLVQQVAMG WLKLSRLWQAEAAIANLSILRAEMNFKFPDALQSLIDLGSDRSGGAELKSLQAQIREEEKKSLALPQDTDKLARYERHIS RGLNQALEHLATLHQQRQNKDSMGSYGYKTVQLVK >Mature_195_residues MVANPEICRANGKKSRGPVTQKGKSIASGNSTRHGLLSVNPPLVMGEDLEVFPGFVQSLIDEYQPTTATEKLLVQQVAMG WLKLSRLWQAEAAIANLSILRAEMNFKFPDALQSLIDLGSDRSGGAELKSLQAQIREEEKKSLALPQDTDKLARYERHIS RGLNQALEHLATLHQQRQNKDSMGSYGYKTVQLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21598; Mature: 21598
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVANPEICRANGKKSRGPVTQKGKSIASGNSTRHGLLSVNPPLVMGEDLEVFPGFVQSLI CCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHH DEYQPTTATEKLLVQQVAMGWLKLSRLWQAEAAIANLSILRAEMNFKFPDALQSLIDLGS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC DRSGGAELKSLQAQIREEEKKSLALPQDTDKLARYERHISRGLNQALEHLATLHQQRQNK CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DSMGSYGYKTVQLVK CCCCCCCCCEEEEEC >Mature Secondary Structure MVANPEICRANGKKSRGPVTQKGKSIASGNSTRHGLLSVNPPLVMGEDLEVFPGFVQSLI CCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHH DEYQPTTATEKLLVQQVAMGWLKLSRLWQAEAAIANLSILRAEMNFKFPDALQSLIDLGS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC DRSGGAELKSLQAQIREEEKKSLALPQDTDKLARYERHISRGLNQALEHLATLHQQRQNK CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DSMGSYGYKTVQLVK CCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA