Click here to switch to the map view.

The map label for this gene is 17230238

Identifier: 17230238

GI number: 17230238

Start: 3345457

End: 3345810

Strand: Direct

Name: 17230238

Synonym: alr2746

Alternate gene names: NA

Gene position: 3345457-3345810 (Clockwise)

Preceding gene: 17230237

Following gene: 17230241

Centisome position: 52.16

GC content: 41.53

Gene sequence:

>354_bases
ATGAAACACTTTTTATTGACATGGCTGGCTACTGCGGTAGCTTTGCTAATTACTGCCCATATTGTCCCTGGATTCACTGT
TAAGAGTTTTGTCGCGGCTCTAGTTGCCGTAATAGTGATTGGGTTAGTCAATGCCTTAGTCAGACCAATTCTCAGTATTT
TGTCATTTCCCGTTACCTTACTGACTTTTGGCTTATTCACATTTGTCATCAATGCTTTAACCCTATGGTTAGCTAGCGCC
CTCATGCCTGGTTCTGACTTCCAAATTGAAGGCTTTTTCGCTGCTTTCTTGGGATCAATTGTGCTGTCTATTGTTTCCAG
CCTCATTAATTATCTTCTGCGAGCAGTTGAATAA

Upstream 100 bases:

>100_bases
TACCCTTACACCCGGTCTCAATAAAAAATCTGGGTGCGTAAGTGCTAGTTTTATGTAATTCTTCTTCCAGTGATTGCTGA
TTTTTGCCAAACAACAACTG

Downstream 100 bases:

>100_bases
AGGTAATTAATGCCAGATTGACTTTGTGTTCGTAGTGAGCGATTAAATGGGTCTGTGAAGTAATTCTTCACGGTGAGAGC
CACTTACTACGAACTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKHFLLTWLATAVALLITAHIVPGFTVKSFVAALVAVIVIGLVNALVRPILSILSFPVTLLTFGLFTFVINALTLWLASA
LMPGSDFQIEGFFAAFLGSIVLSIVSSLINYLLRAVE

Sequences:

>Translated_117_residues
MKHFLLTWLATAVALLITAHIVPGFTVKSFVAALVAVIVIGLVNALVRPILSILSFPVTLLTFGLFTFVINALTLWLASA
LMPGSDFQIEGFFAAFLGSIVLSIVSSLINYLLRAVE
>Mature_117_residues
MKHFLLTWLATAVALLITAHIVPGFTVKSFVAALVAVIVIGLVNALVRPILSILSFPVTLLTFGLFTFVINALTLWLASA
LMPGSDFQIEGFFAAFLGSIVLSIVSSLINYLLRAVE

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 12562; Mature: 12562

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFLLTWLATAVALLITAHIVPGFTVKSFVAALVAVIVIGLVNALVRPILSILSFPVTL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTFGLFTFVINALTLWLASALMPGSDFQIEGFFAAFLGSIVLSIVSSLINYLLRAVE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHFLLTWLATAVALLITAHIVPGFTVKSFVAALVAVIVIGLVNALVRPILSILSFPVTL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTFGLFTFVINALTLWLASALMPGSDFQIEGFFAAFLGSIVLSIVSSLINYLLRAVE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8550407; 12000953 [H]