| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230237
Identifier: 17230237
GI number: 17230237
Start: 3344178
End: 3345095
Strand: Direct
Name: 17230237
Synonym: alr2745
Alternate gene names: NA
Gene position: 3344178-3345095 (Clockwise)
Preceding gene: 17230236
Following gene: 17230238
Centisome position: 52.14
GC content: 48.04
Gene sequence:
>918_bases ATGAAAGGCTGCTTGAGAGCAAGTATCAGTTACTTAAAACCACAAAAGGCATTTTGCTATTTCAGCACAAGCAAGTTGTA TTGGCTACTTATGTTATCCTCTACAACTATGTTTGTTGACTCGTTGGCTGTAGTAGCGATCGCCACACCACAACAAATTG CCCAACAAGTTGTTATCAACCGTCCTACCCTTAAGATTGGTAGTCAAGGTGAACGTGTCTCGGAACTTCAAGCAGCGCTG AGGCTTTTGGGCTTTTACTCAGGTGCAATAGATGGAGTCTACAACGAGAATACGGCCAATGCTGTGTCTGGGTTTAAACA AGCAGCTGGCTTAACTCCAGATGGCATTGTTGATGCTGCTACCTGGCAAAGGTTGTTTCCTAGTCAAGCAATAGGTACGC CAATAGCGTCTATACCAAACTCAACGCCCAATCCACCAGCCGTGTCAACAACTGGTTTCCCTGTTCCCACTCAACCCGTT ACCACTCCTACCGTTAACCCCAGACCAACAACACCCAATCCACCAGCTAACACCAGACCTGAACCTAGACTGGCTAATCC TAGACCTACACCTCCCAGACCAACAACGCCAACCCCAAGACAACAAACCCCTCAACGACCATCTTCCACCCCACGTTTCG GCCCTACACCATCTGCTCAACGAATTTCTGGTATACAATACACCTCCGAAGGCTGGCCGATTTTGCGTGTAGGAATGAAG AATTCGGAAGTTACCAAGCTACAGCAAAGATTGAGTCAGCTTGGTTTTTTAAAGGGTAGTGTGGATGGATACTTTGGGGT TCAGACTGAGGAAGCACTCAAAGCTGCTCAAAGACGCTATGGTATAGAACCTGACGGCGTAGCTGGTGGCGCTACTTGGG AGGCGTTATTGCGGCGCTCATCTCCTCAACGACGATAG
Upstream 100 bases:
>100_bases TTAATCCCTTCATCACTTACCACTCATTACTCAAAAAAGACTACTCAATTACCTCACACGGCAGTAATATTAGCATCAGA AGATTCTGAGAGCAATTTCT
Downstream 100 bases:
>100_bases ACTGAAACAAGTTAGCAGTAGTGTGGTGTTGAGCCGAGTTTTGAGTCCTCAATGGCTATCTTAACTCAGCGTTAATTTCG TTCCTCACACCGAGGACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKGCLRASISYLKPQKAFCYFSTSKLYWLLMLSSTTMFVDSLAVVAIATPQQIAQQVVINRPTLKIGSQGERVSELQAAL RLLGFYSGAIDGVYNENTANAVSGFKQAAGLTPDGIVDAATWQRLFPSQAIGTPIASIPNSTPNPPAVSTTGFPVPTQPV TTPTVNPRPTTPNPPANTRPEPRLANPRPTPPRPTTPTPRQQTPQRPSSTPRFGPTPSAQRISGIQYTSEGWPILRVGMK NSEVTKLQQRLSQLGFLKGSVDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEALLRRSSPQRR
Sequences:
>Translated_305_residues MKGCLRASISYLKPQKAFCYFSTSKLYWLLMLSSTTMFVDSLAVVAIATPQQIAQQVVINRPTLKIGSQGERVSELQAAL RLLGFYSGAIDGVYNENTANAVSGFKQAAGLTPDGIVDAATWQRLFPSQAIGTPIASIPNSTPNPPAVSTTGFPVPTQPV TTPTVNPRPTTPNPPANTRPEPRLANPRPTPPRPTTPTPRQQTPQRPSSTPRFGPTPSAQRISGIQYTSEGWPILRVGMK NSEVTKLQQRLSQLGFLKGSVDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEALLRRSSPQRR >Mature_305_residues MKGCLRASISYLKPQKAFCYFSTSKLYWLLMLSSTTMFVDSLAVVAIATPQQIAQQVVINRPTLKIGSQGERVSELQAAL RLLGFYSGAIDGVYNENTANAVSGFKQAAGLTPDGIVDAATWQRLFPSQAIGTPIASIPNSTPNPPAVSTTGFPVPTQPV TTPTVNPRPTTPNPPANTRPEPRLANPRPTPPRPTTPTPRQQTPQRPSSTPRFGPTPSAQRISGIQYTSEGWPILRVGMK NSEVTKLQQRLSQLGFLKGSVDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEALLRRSSPQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32954; Mature: 32954
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGCLRASISYLKPQKAFCYFSTSKLYWLLMLSSTTMFVDSLAVVAIATPQQIAQQVVIN CCHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHEEECHHHHHHHHHHC RPTLKIGSQGERVSELQAALRLLGFYSGAIDGVYNENTANAVSGFKQAAGLTPDGIVDAA CCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH TWQRLFPSQAIGTPIASIPNSTPNPPAVSTTGFPVPTQPVTTPTVNPRPTTPNPPANTRP HHHHHCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPRLANPRPTPPRPTTPTPRQQTPQRPSSTPRFGPTPSAQRISGIQYTSEGWPILRVGMK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCCCEEEECCC NSEVTKLQQRLSQLGFLKGSVDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEALLRRS CHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC SPQRR CCCCC >Mature Secondary Structure MKGCLRASISYLKPQKAFCYFSTSKLYWLLMLSSTTMFVDSLAVVAIATPQQIAQQVVIN CCHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHEEECHHHHHHHHHHC RPTLKIGSQGERVSELQAALRLLGFYSGAIDGVYNENTANAVSGFKQAAGLTPDGIVDAA CCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH TWQRLFPSQAIGTPIASIPNSTPNPPAVSTTGFPVPTQPVTTPTVNPRPTTPNPPANTRP HHHHHCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPRLANPRPTPPRPTTPTPRQQTPQRPSSTPRFGPTPSAQRISGIQYTSEGWPILRVGMK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCCCEEEECCC NSEVTKLQQRLSQLGFLKGSVDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEALLRRS CHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC SPQRR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA