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The map label for this gene is ldcA [C]

Identifier: 17230215

GI number: 17230215

Start: 3319149

End: 3320048

Strand: Direct

Name: ldcA [C]

Synonym: alr2723

Alternate gene names: 17230215

Gene position: 3319149-3320048 (Clockwise)

Preceding gene: 17230214

Following gene: 17230217

Centisome position: 51.75

GC content: 46.11

Gene sequence:

>900_bases
ATGAAATCGACCATCTTACCTAAACCCCTCAAACCCGGAGATTTACTGCGAGTTATTGCTCCTAGCGGTGCTTTAAGAGA
ATTTGCGGCTTTGAAGCAGAGTGTAGAAATTTGGCGATCGCGCGGTTATCGTATAGAAGTTAGCTCAGATATTGATCATC
ATTGGGGATATCTGGCTAATAAAGATGAAGTGCGTCGTCATCAGCTAGCTTCTGCTTGGCAAGACCCTGATTGTCGCGGT
ATTCTCTGCGCCAGAGGTGGTTTTGGTAGCACACGCATCTTAGAAGATTGGCATTGGCAAACCAACTCAGACCCAAAATG
GTTGATTGGCTTTTCTGATATTACTGCTTTGTTGTGGAGTCTTTATAACGCAGGTATATCCGGTGTTCACGGCCCTGTAC
TCACAACTTTGGCAGATGAGCCAGACTGGTCAACTGAGCGCCTATTTAATTTGGTAGAAGGACGACCTATTGCACCCCTT
AAAGGCTGTGGTTGGGGTGGTGGTGTGGCTACTGGCATTTTGCTTCCCGGTAATCTTACGGTGGCCACCCATCTTTTAAG
CACACCAATTCAACCTAACTTTGATGGCGTAATTTTAGCTCTGGAAGATGTCACAGAAGCACCGTACCGTATCGACAGAA
TGCTGACACAGTGGCGTTTAAGTGGTGTTTTAGCAAAAGTCAAAGGTATTGCCTTGGGAAGCTTTACTCGATGCGAAGCA
GCCCCAAATATACCCAGTTTTAACACAGAAGAAGTTCTGCGCGATCGCTTGGCTGACTTGGGTATTCCTATTGTCTCCGA
TTTACCATTTGGTCATGGTGAACACAATGCCAGCCTACCCGTAGGTGTACCTGTCACCTTAGATGCAAATCACGGAGTCT
TGGATATAGTAACCCTTTAA

Upstream 100 bases:

>100_bases
CTAAAACAGATGCGGGTTTAGATGCACACATCTGATTGACAAACTGGTATAAATCTTTCCTATGGGCTATTCTGAATTTT
GACTTTTGCAAAAATTATTG

Downstream 100 bases:

>100_bases
ATAAATCTACTTGTTTAAACTATCATTTAACCGAGTACCAGTATAATTAGGAACCCAGCCATCTGCTGCTGTGAAATAAC
GCACTGCTTTAAAATTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKSTILPKPLKPGDLLRVIAPSGALREFAALKQSVEIWRSRGYRIEVSSDIDHHWGYLANKDEVRRHQLASAWQDPDCRG
ILCARGGFGSTRILEDWHWQTNSDPKWLIGFSDITALLWSLYNAGISGVHGPVLTTLADEPDWSTERLFNLVEGRPIAPL
KGCGWGGGVATGILLPGNLTVATHLLSTPIQPNFDGVILALEDVTEAPYRIDRMLTQWRLSGVLAKVKGIALGSFTRCEA
APNIPSFNTEEVLRDRLADLGIPIVSDLPFGHGEHNASLPVGVPVTLDANHGVLDIVTL

Sequences:

>Translated_299_residues
MKSTILPKPLKPGDLLRVIAPSGALREFAALKQSVEIWRSRGYRIEVSSDIDHHWGYLANKDEVRRHQLASAWQDPDCRG
ILCARGGFGSTRILEDWHWQTNSDPKWLIGFSDITALLWSLYNAGISGVHGPVLTTLADEPDWSTERLFNLVEGRPIAPL
KGCGWGGGVATGILLPGNLTVATHLLSTPIQPNFDGVILALEDVTEAPYRIDRMLTQWRLSGVLAKVKGIALGSFTRCEA
APNIPSFNTEEVLRDRLADLGIPIVSDLPFGHGEHNASLPVGVPVTLDANHGVLDIVTL
>Mature_299_residues
MKSTILPKPLKPGDLLRVIAPSGALREFAALKQSVEIWRSRGYRIEVSSDIDHHWGYLANKDEVRRHQLASAWQDPDCRG
ILCARGGFGSTRILEDWHWQTNSDPKWLIGFSDITALLWSLYNAGISGVHGPVLTTLADEPDWSTERLFNLVEGRPIAPL
KGCGWGGGVATGILLPGNLTVATHLLSTPIQPNFDGVILALEDVTEAPYRIDRMLTQWRLSGVLAKVKGIALGSFTRCEA
APNIPSFNTEEVLRDRLADLGIPIVSDLPFGHGEHNASLPVGVPVTLDANHGVLDIVTL

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=287, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32640; Mature: 32640

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTILPKPLKPGDLLRVIAPSGALREFAALKQSVEIWRSRGYRIEVSSDIDHHWGYLAN
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCCCC
KDEVRRHQLASAWQDPDCRGILCARGGFGSTRILEDWHWQTNSDPKWLIGFSDITALLWS
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEHHHHHHHHHH
LYNAGISGVHGPVLTTLADEPDWSTERLFNLVEGRPIAPLKGCGWGGGVATGILLPGNLT
HHHCCCCCCCCCHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCCHH
VATHLLSTPIQPNFDGVILALEDVTEAPYRIDRMLTQWRLSGVLAKVKGIALGSFTRCEA
HHHHHHHCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
APNIPSFNTEEVLRDRLADLGIPIVSDLPFGHGEHNASLPVGVPVTLDANHGVLDIVTL
CCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEC
>Mature Secondary Structure
MKSTILPKPLKPGDLLRVIAPSGALREFAALKQSVEIWRSRGYRIEVSSDIDHHWGYLAN
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCCCC
KDEVRRHQLASAWQDPDCRGILCARGGFGSTRILEDWHWQTNSDPKWLIGFSDITALLWS
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEHHHHHHHHHH
LYNAGISGVHGPVLTTLADEPDWSTERLFNLVEGRPIAPLKGCGWGGGVATGILLPGNLT
HHHCCCCCCCCCHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCCHH
VATHLLSTPIQPNFDGVILALEDVTEAPYRIDRMLTQWRLSGVLAKVKGIALGSFTRCEA
HHHHHHHCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
APNIPSFNTEEVLRDRLADLGIPIVSDLPFGHGEHNASLPVGVPVTLDANHGVLDIVTL
CCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]