| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yeaD [H]
Identifier: 17230201
GI number: 17230201
Start: 3304859
End: 3305728
Strand: Direct
Name: yeaD [H]
Synonym: alr2709
Alternate gene names: 17230201
Gene position: 3304859-3305728 (Clockwise)
Preceding gene: 17230200
Following gene: 17230202
Centisome position: 51.53
GC content: 44.14
Gene sequence:
>870_bases GTGTTTAGTATTGCCATCCAACAGCAACAGTACAAAACCTATATCCTTTCTGATGAAACGACTGGTTCTCAATTGGAAGT TGTACCAGAACGTGGCGGTATTATTACCCGTTGGCGTGTGAAGGGAGAGGAAATTCTCTACCTAGATGCTGAACGCTTCA CTCATCCGGATTTGAGCGTCAGAGGTGGAGTACCAATTCTATTTCCCATCTGCGGCAACTTACCGGATAATTCTTACACC CTCAACGGTCAGCAGCACACACTCAAACAACATGGGTTTGCCCGTGATTTGCCCTGGGAAGTAGTTGAGCAGACCACTAA GGACTCAGCTGCACTGACGTTAGTTCTCCGTAGCAACGAACAAACAAAGGCGGTTTATCCTTTCGATTTCCAATTAGTAT TCACTTACGTACTACGAGGGAATACTCTAGAAATTCGCCAGGAGTACCAAAATCTGTCATCTACGCAATTGCCATTCTCG GCTGGGTTCCATCCTTACTTCTTTACTGGAGATAAAAATCAACTGGAATTTGACATTCCCTCCCAGGAGTATCAAGACCA GCAAACAAAGGAAGTTCATCCCTTTAATGGCAATTTTGACTTTAACCGTGATGAAATGGATTTTGCGTTTGGTCACATCA CCAGCCAGTCTGCTAGTGTCATCGACCGTAATCGGCAGTTTAAACTAACTTTGGATGCTGATGATATTTTTTCAATGTTG GTATTTTGGACGCTCAAGGGCAAAGAATTCTATTGTCTAGAACCTTGGAGCGCTCCTCGTAACTCCCTGAATACTGGTGA AAAGCTGACGGTGCTAGAGCCAGGCACTAGCTACAAAGCATCTGTAAGATTGTCGGCAAGTTTTTTCTAA
Upstream 100 bases:
>100_bases TAGGGATTGGGGATTAGGGATTATATATTTAGCTCTGAACCCCAATGCTTCTAGCCCCTAATCTCTCGCCTCCAGCCCCT AGCCTCTGAGGACTCAACTT
Downstream 100 bases:
>100_bases AAACCCTTTACAAGTCTACGGTTGTTTATGCTATGATGGCAAAGTTGCGAAACAAACCGCAAGGGTCGCTAACTCAACGG TAGAGTACTCGGCTTTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MFSIAIQQQQYKTYILSDETTGSQLEVVPERGGIITRWRVKGEEILYLDAERFTHPDLSVRGGVPILFPICGNLPDNSYT LNGQQHTLKQHGFARDLPWEVVEQTTKDSAALTLVLRSNEQTKAVYPFDFQLVFTYVLRGNTLEIRQEYQNLSSTQLPFS AGFHPYFFTGDKNQLEFDIPSQEYQDQQTKEVHPFNGNFDFNRDEMDFAFGHITSQSASVIDRNRQFKLTLDADDIFSML VFWTLKGKEFYCLEPWSAPRNSLNTGEKLTVLEPGTSYKASVRLSASFF
Sequences:
>Translated_289_residues MFSIAIQQQQYKTYILSDETTGSQLEVVPERGGIITRWRVKGEEILYLDAERFTHPDLSVRGGVPILFPICGNLPDNSYT LNGQQHTLKQHGFARDLPWEVVEQTTKDSAALTLVLRSNEQTKAVYPFDFQLVFTYVLRGNTLEIRQEYQNLSSTQLPFS AGFHPYFFTGDKNQLEFDIPSQEYQDQQTKEVHPFNGNFDFNRDEMDFAFGHITSQSASVIDRNRQFKLTLDADDIFSML VFWTLKGKEFYCLEPWSAPRNSLNTGEKLTVLEPGTSYKASVRLSASFF >Mature_289_residues MFSIAIQQQQYKTYILSDETTGSQLEVVPERGGIITRWRVKGEEILYLDAERFTHPDLSVRGGVPILFPICGNLPDNSYT LNGQQHTLKQHGFARDLPWEVVEQTTKDSAALTLVLRSNEQTKAVYPFDFQLVFTYVLRGNTLEIRQEYQNLSSTQLPFS AGFHPYFFTGDKNQLEFDIPSQEYQDQQTKEVHPFNGNFDFNRDEMDFAFGHITSQSASVIDRNRQFKLTLDADDIFSML VFWTLKGKEFYCLEPWSAPRNSLNTGEKLTVLEPGTSYKASVRLSASFF
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=143, Percent_Identity=32.8671328671329, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323746, Length=272, Percent_Identity=26.8382352941176, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 33207; Mature: 33207
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIAIQQQQYKTYILSDETTGSQLEVVPERGGIITRWRVKGEEILYLDAERFTHPDLSV CEEEEEECCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCEEEEEEHHHCCCCCCEE RGGVPILFPICGNLPDNSYTLNGQQHTLKQHGFARDLPWEVVEQTTKDSAALTLVLRSNE CCCCCEEEEECCCCCCCCEEECCHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEEECCC QTKAVYPFDFQLVFTYVLRGNTLEIRQEYQNLSSTQLPFSAGFHPYFFTGDKNQLEFDIP CCEEECCCCHHEEEEEHHCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEECC SQEYQDQQTKEVHPFNGNFDFNRDEMDFAFGHITSQSASVIDRNRQFKLTLDADDIFSML CHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEECHHHHHHHH VFWTLKGKEFYCLEPWSAPRNSLNTGEKLTVLEPGTSYKASVRLSASFF EEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECC >Mature Secondary Structure MFSIAIQQQQYKTYILSDETTGSQLEVVPERGGIITRWRVKGEEILYLDAERFTHPDLSV CEEEEEECCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCEEEEEEHHHCCCCCCEE RGGVPILFPICGNLPDNSYTLNGQQHTLKQHGFARDLPWEVVEQTTKDSAALTLVLRSNE CCCCCEEEEECCCCCCCCEEECCHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEEECCC QTKAVYPFDFQLVFTYVLRGNTLEIRQEYQNLSSTQLPFSAGFHPYFFTGDKNQLEFDIP CCEEECCCCHHEEEEEHHCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEECC SQEYQDQQTKEVHPFNGNFDFNRDEMDFAFGHITSQSASVIDRNRQFKLTLDADDIFSML CHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEECHHHHHHHH VFWTLKGKEFYCLEPWSAPRNSLNTGEKLTVLEPGTSYKASVRLSASFF EEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]